Parental gene: | RNMTL1, ENSCJAG00000021701 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 5:59290143..59299360(+) |
>ENSCJAG00000021701
ATGGCCGCGCTGGGTAAACCCGGGCGGTTTGCCTTGCGACCGTTGCTGCTGGTGGTCCAGGCTTGGGACCTTGGCGCGAG
GCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAGTGGCGTTTCCTTTCGGAGAGGTGGTGGAACGGAAGTGCGCTC
CTGGGAAGCAGCCCCGCAAGGCAGCATATGAAGCCAGTGCCCACGAGCCACAAGAGAAACAGCCGCTTGAGATGTCCCCA
TCCCACACTCCCAGCACCTGGGAAGAGTCTGGGCTTCGCTACGATAAGGCTTTTCCCGGGGACAGGAGGCTGAGTAGTGT
GATGACAATAGTCAAGTCCAGGCCATTTCGGGAAAAACAAGGGAAGATCCTGCTGGAGGGTCGCAGGCTCATCGCAGACG
CTCTCAAGGCTGGAGCTGTGCCGAAGGTTTTCTTCTTTAGCCGTGTAGAATACCTAAAGGAGCTGCCAGTCGATAAGCTG
AAAGGTGTCAGCCTCATTAAGGTGAAATTTGAAGATATCAAGGATTGGTCTGACCTAGTAACGCCGCAAGGAATAATGGG
GATTTTTGCTAAGCCTGACCATGTTAAGATGACATATCCAAAGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTT
GTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGAGATCTGCAGCTGGGGCAGGCTGTAGCAAAGTGTTACTC
ACCAAAGGCTGCGTGGATGCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGAGTGCACATTTCCAGGTGCCCATTATCAA
CAATCTGGAATGGGAAACTGTGCCCAATTACCTGCCCCCTGACACCCGCATCTACGTGGCTGACAACTGTGGCCGTTACG
CCCAAGCTCAGGTGTCTAATAAAGCGGGTGACCACGGCTGGGTGTGTGACCAGCGAGCCCTCAAGTCTCACAGGTATGAG
GAGGAGGAAGATGTAGAAACTGGAGCCAGTCAGGATTGGCTGCCTGAGGTTGAGGTTCAGAGTTACGACTTGGACTGGAC
CGAGGCGCCGGCGGCTGTGGTGGTGGGTGGGGAGACCCACGGCGTGAGCCTAGAGTCCCTGCAGTTGGCCGAGAGCACTG
GTGGCAAGCGGCTGCTGATCCCCGTCGTGCCCGGCGTGGACAGCCTCAACTCAGCCATGGCGGCGAGCATCCTGCTTTTC
GAAGGGAGGAGACAGCTGCGGGTGAGGGCGGAGCACCTGCACAGGAGTTCCCACTGA
ATGGCCGCGCTGGGTAAACCCGGGCGGTTTGCCTTGCGACCGTTGCTGCTGGTGGTCCAGGCTTGGGACCTTGGCGCGAG
GCGCTGGGTCCGGGCGCTGCGGCGGAGCCCAGTGAAAGTGGCGTTTCCTTTCGGAGAGGTGGTGGAACGGAAGTGCGCTC
CTGGGAAGCAGCCCCGCAAGGCAGCATATGAAGCCAGTGCCCACGAGCCACAAGAGAAACAGCCGCTTGAGATGTCCCCA
TCCCACACTCCCAGCACCTGGGAAGAGTCTGGGCTTCGCTACGATAAGGCTTTTCCCGGGGACAGGAGGCTGAGTAGTGT
GATGACAATAGTCAAGTCCAGGCCATTTCGGGAAAAACAAGGGAAGATCCTGCTGGAGGGTCGCAGGCTCATCGCAGACG
CTCTCAAGGCTGGAGCTGTGCCGAAGGTTTTCTTCTTTAGCCGTGTAGAATACCTAAAGGAGCTGCCAGTCGATAAGCTG
AAAGGTGTCAGCCTCATTAAGGTGAAATTTGAAGATATCAAGGATTGGTCTGACCTAGTAACGCCGCAAGGAATAATGGG
GATTTTTGCTAAGCCTGACCATGTTAAGATGACATATCCAAAGACTCAGCTTCAGCATTCACTGCCTTTATTATTGATTT
GTGACAATCTCCGTGACCCTGGGAACCTGGGGACAATTCTGAGATCTGCAGCTGGGGCAGGCTGTAGCAAAGTGTTACTC
ACCAAAGGCTGCGTGGATGCCTGGGAGCCCAAAGTGCTCCGGGCGGGTATGAGTGCACATTTCCAGGTGCCCATTATCAA
CAATCTGGAATGGGAAACTGTGCCCAATTACCTGCCCCCTGACACCCGCATCTACGTGGCTGACAACTGTGGCCGTTACG
CCCAAGCTCAGGTGTCTAATAAAGCGGGTGACCACGGCTGGGTGTGTGACCAGCGAGCCCTCAAGTCTCACAGGTATGAG
GAGGAGGAAGATGTAGAAACTGGAGCCAGTCAGGATTGGCTGCCTGAGGTTGAGGTTCAGAGTTACGACTTGGACTGGAC
CGAGGCGCCGGCGGCTGTGGTGGTGGGTGGGGAGACCCACGGCGTGAGCCTAGAGTCCCTGCAGTTGGCCGAGAGCACTG
GTGGCAAGCGGCTGCTGATCCCCGTCGTGCCCGGCGTGGACAGCCTCAACTCAGCCATGGCGGCGAGCATCCTGCTTTTC
GAAGGGAGGAGACAGCTGCGGGTGAGGGCGGAGCACCTGCACAGGAGTTCCCACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 4 .03 RPM |
| SRP051959_skeletal_muscle | 5 .87 RPM |
| SRP051959_lymph_node | 4 .09 RPM |
| SRP051959_lung | 4 .33 RPM |
| SRP051959_liver | 3 .96 RPM |
| SRP051959_kidney | 3 .90 RPM |
| SRP051959_heart | 4 .14 RPM |
| SRP051959_colon | 3 .15 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Homo sapiens | ENSG00000171861 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015518 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000011423 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000570 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007762 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_3130 | 71.32 | 62.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000021701 retrocopies