Parental gene: | KCTD18, ENSCJAG00000031173 |
| Aliases: | None |
| Description: | potassium channel tetramerization domain containing 18 [Source:HGNC Symbol;Acc:26446] |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 6:115821460..115827489(-) |
>ENSCJAG00000031173
ATGGAAGGCCACGAGGCAGAAGAAGAGGTGCTAGATATTCTCCGACTGAATGTGGGTGGCTGTGTTTACACAGCCCGGCG
GGAGTCCTTGTGCCGCTTTAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAG
GGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACA
GATGAGCAAACCCGCATTGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCGTATAGCCTGTCAGACCACTT
GGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATG
GCTTGGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATT
GGTGTGTATGCCACAAAAAATGATGGAACAGATGCTATTGATAAGCAGCTGGGAGGAAGAATTCACAGCAAAAGCATTTT
TAAAAGAGAGGCGGGAAATAATGTACAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCT
TTGATGCTTGGGAAGGAAAAGGTACAGTG
ATGGAAGGCCACGAGGCAGAAGAAGAGGTGCTAGATATTCTCCGACTGAATGTGGGTGGCTGTGTTTACACAGCCCGGCG
GGAGTCCTTGTGCCGCTTTAAGGACTCCATGTTGGCATCTATGTTCAGTGGTCGCTTTCCTCTAAAAACAGATGAGTCAG
GGGCTTGTGTTATTGACCGTGATGGACGTCTATTTAAATACCTTTTGGATTACCTTCATGGAGAAGTTCAGATTCCCACA
GATGAGCAAACCCGCATTGCCCTACAGGAAGAGGCTGATTACTTTGGCATCCCTTATCCGTATAGCCTGTCAGACCACTT
GGCCAATGAAATGGAGACATATTCTTTAAGGTCAAATATAGAACTTAAAAAGGCTTTAACAGACTTCTGTGATTCATATG
GCTTGGTCTGCAATAAACCAACAGTTTGGGTTCTCCACTATCTTAACACATCTGGTGCAAGCTGTGAGAGTAGAATTATT
GGTGTGTATGCCACAAAAAATGATGGAACAGATGCTATTGATAAGCAGCTGGGAGGAAGAATTCACAGCAAAAGCATTTT
TAAAAGAGAGGCGGGAAATAATGTACAGTACATTTGGAGCTATTATTCAGTAGCAGAGTTGAAGAAAATGATGGATGCCT
TTGATGCTTGGGAAGGAAAAGGTACAGTG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 1 .62 RPM |
| SRP051959_skeletal_muscle | 0 .48 RPM |
| SRP051959_lymph_node | 2 .33 RPM |
| SRP051959_lung | 1 .92 RPM |
| SRP051959_liver | 1 .10 RPM |
| SRP051959_kidney | 1 .24 RPM |
| SRP051959_heart | 1 .07 RPM |
| SRP051959_colon | 1 .62 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Otolemur garnettii | ENSOGAG00000012335 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000008420 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_1956 | 79.64 | 98.65 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3169 | 98.65 | 99.10 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000031173 retrocopies