Parental gene:

RNASEH1, ENSCJAG00000035450

Aliases:None
Description:ribonuclease H1 [Source:HGNC Symbol;Acc:18466]
Organism:Marmoset (Callithrix jacchus)
Coordinates:14:105221630..105231072(+)


>ENSCJAG00000035450
ATGAGCCGGCTTCTGTTTCTGGCCCACAGAGTCGCCTTGGCCGCCGTGCGCTGTCGCCCCGCCTCTCGTGGGTTCGGGAT
GTTCTATGCCGTGAGGAGGGGCCGCAAGACCGGGGTCTTTCTGACCTGGAATGAGTGCAAGGCTCAGGTGGACCGGTTTC
CTGCTGCCAGATTTAAGAAGTTTGCCACAGAGGATGAGGCCTGGGCCTTTGTCAGGAAATCTGCAAGCCCAGAAGCTTCA
GAAGGGCAGGAAAATCAACATGGACAAGAATCACAGATGAAAGCCAGCAAGAGACTCCGTGAGCCACTGGATGGAGATGG
AGATGAAGGTGCAGAGCCATATGCAAAGCACTTGAAGCCCAGTGTGGAGCCGGCGCCTCCAGTTAGCAGAGACCTGTTTT
CCTACATGGGAGACTCAGTTGTCGTCTACACGGATGGCTGCTGCTGCAGTAATGGGCGGAGGAGGCCACGAGCAGGAATC
GGCGTTTACTGGGGGCCGGGCCATCTTTGTAAAAATGTAGGCATTAGACTTCCCGGGCGACAGACAAACCAAAGAGCAGA
AATTCATGCAGCCTGCAAAGCCATTGAACAAGCAAAGGCTCAAAACATCAGTAAACTGGTTGTGTATACAGACAGCATGT
TTACCATAAATGGCATAACTAACTGGGTTCAAGGTTGGAAGAAAAATGGGTGGAAGACAAGTACAGGGAAAGAGGTGATC
AACAAAGAGGACTTTGTGGCACTGGAGAGGCTCACCCAGGGCATGGACATCCAGTGGATGCACGTTCCTGGTCATTCGGG
GTTTATGGGCAATGAAGAAGCTGATAGATTAGCCAGAGAAGGAGCTAAACAATCGGAAGACTGA

Library Parental gene expression (RPM)
SRP051959_spleen 8 .03 RPM
SRP051959_skeletal_muscle 7 .86 RPM
SRP051959_lymph_node 8 .01 RPM
SRP051959_lung 7 .26 RPM
SRP051959_liver 5 .81 RPM
SRP051959_kidney 8 .79 RPM
SRP051959_heart 6 .98 RPM
SRP051959_colon 6 .70 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000008547 ortholog_one2one 6 retrogenes
retro_chof_158, retro_chof_1653, retro_chof_1836, retro_chof_2224, retro_chof_485, retro_chof_843,
Echinops telfairi ENSETEG00000012674 ortholog_one2one 1 retrogene
retro_etel_1286,
Homo sapiens ENSG00000171865 ortholog_one2one 2 retrogenes
retro_hsap_1814, retro_hsap_300,
Gorilla gorilla ENSGGOG00000034822 ortholog_one2one 2 retrogenes
retro_ggor_2175, retro_ggor_336,
Macropus eugenii ENSMEUG00000003610 ortholog_one2one 1 retrogene
retro_meug_1172,
Macaca mulatta ENSMMUG00000014475 ortholog_one2one 2 retrogenes
retro_mmul_544, retro_mmul_799,
Monodelphis domestica ENSMODG00000014491 ortholog_one2many 1 retrogene
retro_mdom_593,
Nomascus leucogenys ENSNLEG00000015400 ortholog_one2one 2 retrogenes
retro_nleu_2399, retro_nleu_2959,
Pongo abelii ENSPPYG00000025873 ortholog_one2many 1 retrogene
retro_pabe_18,
Pan troglodytes ENSPTRG00000011614 ortholog_one2one 1 retrogene
retro_ptro_244,
Pteropus vampyrus ENSPVAG00000002070 ortholog_one2one 1 retrogene
retro_pvam_144,
Sarcophilus harrisii ENSSHAG00000013051 ortholog_one2one 1 retrogene
retro_shar_245,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_3811 88.18 76.66
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Download FASTA sequences of all ENSCJAG00000035450 retrocopies