Parental gene:

PMM2, ENSCPOG00000000235

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:28030323..28053349(+)


>ENSCPOG00000000235
ATGGCTACGACCCGCCCAGTGCTGTGCCTCTTTGATGTGGATGGGACCCTGACGGCCCCGCGGCAGAAAATTACCAAAGA
AATGGATGACTTTCTACAAAAATTGAAGCAGAAGATCAAAATTGGAGTGGTAGGCGGCTCAGACTTGGAGAAAGTACAGG
AACAACTGGGAAATGATGTGGTGCAGAAATATAACTATGTGTTTCCAGAAAATGGCTTGGTAGCATTTAAGGATGGGAAA
CTCTTATGTAAACAGAGTATTCAAGGTCACCTGGGTGAGGCCCTAATTCAAGATTTAATCAACTACTGTCTAAGCTACAT
TGCAAAAATTAAACTCCCGAAGAAAAGGGGCACTTTCATTGAGTTCCGAAATGGGATGCTGAATGTGTCCCCTGTTGGAC
GAAGCTGCAGCCAAGAGGAACGCATTGAGTTCTACGAACTTGATAAAAAAGAAAACATAAGACAAAAATTCGTAGCAGAT
CTGCAGAAGGAATTTGCAGGGAAAGGCCTCACATTTTCCATAGGAGGCCAGATCAGCTTTGATGTCTTTCCTGATGGATG
GGACAAGAGATACTGCCTGCGACATGTGGAAAATGACGGTTACAAGACCATTTACTTCTTTGGAGACAAAACTATGCCAG
GTGGCAATGACTATGAGATCTTCACAGATCCTCGAACTGTGGGCTACACCGTGACAGCACCCGAGGACACACGCAGGATT
TGTGAAGAGCTCTTCGCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 11 .39 RPM
SRP017611_kidney 15 .28 RPM
SRP017611_liver 8 .62 RPM
SRP040447_lung 10 .04 RPM
SRP040447_skeletal_muscle 8 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000140650 ortholog_one2one 2 retrogenes
retro_hsap_1869, retro_hsap_1913,
Gorilla gorilla ENSGGOG00000010124 ortholog_one2one 1 retrogene
retro_ggor_1399,
Monodelphis domestica ENSMODG00000005737 ortholog_one2many 1 retrogene
retro_mdom_285,
Nomascus leucogenys ENSNLEG00000010062 ortholog_one2one 1 retrogene
retro_nleu_3062,
Otolemur garnettii ENSOGAG00000016560 ortholog_one2many 1 retrogene
retro_ogar_1095,
Pongo abelii ENSPPYG00000007084 ortholog_one2one 2 retrogenes
retro_pabe_1583, retro_pabe_1584,
Pan troglodytes ENSPTRG00000007748 ortholog_one2one 2 retrogenes
retro_ptro_1249, retro_ptro_1279,
Sus scrofa ENSSSCG00000021236 ortholog_one2one 1 retrogene
retro_sscr_329,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_810 76.86 97.97
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Download FASTA sequences of all ENSCPOG00000000235 retrocopies