Parental gene:

PPID, ENSCPOG00000001046

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_7:35065240..35078418(-)


>ENSCPOG00000001046
ATGTCGCATCCGTCCCCACAAGCCAAGCCCTCCAACCCTAGCAACCCCCGGGTCTTCTTTGACGTGGATGTCGGCGGGGA
GCGAGTTGGTCGGATTGTTTTAGAGTTGTTTGCGGATATTGTACCCAAAACTGCAGAAAATTTTCGTGCACTATGTACAG
GAGAAAAAGGCATTGGACCCACGACTGGGAAACCTCTTCATTTCAAAGGATGTCCTTTCCATCGAATTATTAAGAAATTT
ATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGAACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAA
TTTTCATTATAAGCACGATCGCGAGGGTTTATTGAGCATGGCAAATGCTGGCCCCAATACCAATGGCTCTCAGTTCTTCA
TCACGACAGTTCCAACCCCTCATCTGGATGGCAAACATGTGGTATTTGGACAAGTGATTAAAGGGATAGGTGTGGCCAGG
CTGCTGGAAAATGTGGAAGTGAATGGTGAAAAACCTGCCAAATTGTGCGTTATTGCAGAATGTGGAGAACTGAAGGAAGG
TGACGACTGGGGGATATTCCCGAAAGATGGCTCTGGCGACTGTCACCCAGATTTCCCTGAAGACTCAGATGTAGATTTCA
AAGATGTAGATAAAATTTTATTAATAACAGAAGACTTAAAAAACCTTGGAAATACTTTTTTCAAGTCTCAGAACTGGGAG
ATGGCCATTAAAAAGTACAGAAAGGTTTTAAGGTATGTGGACAGCTCCAAGGCTATTCTTCCGGAAGCTGCCGCGCCCCG
GCTGCAGCCTGTGGCCTTGAGCTGCGTGCTCAACATCGGTGCCTGTAAACTGAAGCTGTCGGACTGGCAGGGCGCCGTGG
ACAGCTGTCTGGAGGCTCTTGAGATGGACCCATCAAATACCAAAGCACTGTATCGCAAAGCTCAAGGATGGCAAGGACTG
AAAGAATATGATCAAGCATTGGCTGATCTTAAGAAAGCTCAAGAGATAGCACCAGAAGATAAAGCTATCCAGGCAGAACT
GCTGAAAGTCAAACAGAAGATTAAGGCACAGAAGGATAAAGAGAAAGCAGTCTATGCAAAAATGTTCGCCTAA

Library Parental gene expression (RPM)
SRP017611_brain 34 .86 RPM
SRP017611_kidney 31 .30 RPM
SRP017611_liver 42 .53 RPM
SRP040447_lung 21 .01 RPM
SRP040447_skeletal_muscle 41 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000012655 possible_ortholog 2 retrogenes
retro_etel_10, retro_etel_633,
Felis catus ENSFCAG00000028926 possible_ortholog 2 retrogenes
retro_fcat_494, retro_fcat_559,
Macaca mulatta ENSMMUG00000017768 possible_ortholog 2 retrogenes
retro_mmul_281, retro_mmul_348,
Rattus norvegicus ENSRNOG00000027408 possible_ortholog 1 retrogene
retro_rnor_188,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_275 63.90 54.32
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2. retro_cpor_436 55.21 50.54
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Download FASTA sequences of all ENSCPOG00000001046 retrocopies