Parental gene: | ENSCPOG00000004210 |
| Aliases: | None |
| Description: | DNA ligase [Source:UniProtKB/TrEMBL;Acc:H0V2M3] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_209:653865..688100(-) |
>ENSCPOG00000004210
ATGCAGCGGAGTATCATGTCATTTTTCTACCCCACCAAAGAGGGTAAAGCAAAGAAGCCTGAGAAGGATACCAACAAGAG
CAGCGGCAGAGAGACAGAGCCCCCTCCAAAGGTGGCACTGAAGGAGCGGAATGGAGTGGTGCCTGATAATGACTCTCCAG
TGAAGAGGTCAGGGAGGAAGGCAGCGCAGGTCTTGAGCAGCGAGGGAGAGGAAGAAGATGAAGCCCTCAGCCCCAGTGAA
GACCAGAAGCCTGAGCCAGATTCCCCACAAGGGTCCCCACCTAACCTCGCCAAATGTCCCAAGAACAGCCCTTCCTTCTC
GGACACCTCCCCTATGGACATCTCCTCTTCAGGAATACCAAAGCGAATTACGGCTCGGAAACAGCTCCCGAAACGGGTAA
TTCAGGACGTCTTGGAGGATCAGAATGAGGACAAAGACAGAGAAGCCAAGAAGAGGAAGGAGGAAAAAGAAGCAGAGACT
CCAAGAGAAAGCCTCGTAGAGACTGGAGCAGCAACAGTGAAGGAAGAAGAGGAGGGGCATCAGCCCTCGACACCCCCTGA
GCCCCCCAAAGCCCCCAAAGCAGAAGCCCCAGCAAAGACAGAAGGTGTTTCCACACCCAAGGTACCCCAGAAGCAGGAGC
CACAGGAAAAGAACCAGAGCAAGGCTGCCCCCAGAGTCTCCAGGAACCTCAGCAGTTTCTTCACACCCCGGAAGCCATCA
GTCAAAACCGATGTGAAACAAGAGCAGTCAGGTACCCCAGGAAAAGAGGAGGCCAAGAGATCCCTGGACCCAGTGAGCTA
CAATCCTGCTAAGAACAACTACCACCCCATCGAGGATGCCTGCTGGAGACAGGGCCAGAAGGTTCCTTACCTGGCTGTGG
CCCGGACATTTGAGAAGATTGAAGAGGTTTCTGCTCGGCTCCGGATGGTGGAGACGCTGAGCAACTTGCTGCGCTCTGTG
GTGGCCCTGTCCCCTCCAGACCTGCTCCCTGTCCTCTACCTCACCCTTAACCGCCTTGGGCCTCCCCAGCAGGGCCTAGA
GCTTGGCGTTGGTGATGGTGTCCTTCTCAAGGCCGTGGCCCAGGCCACAGGCCGCCAACTGGAATCTGTCCGGGCTGAGG
CTGTTGAGAAGGGAGACATTGGGCTGGTGGCTGAGAACAGCCGCAGTACTCAGAGACTGATGCTGCCACCACCCCCTCTT
ACCACCTCTGGAGTCTTCTCCAAGTTTCGGGACATTGCCCGGCTCACTGGCAATGCTTCCATGACCAAGAAGATGGATAT
CATCAAAGGCCTCTTTGTTGCCTGCCGCCACTCAGAAGCCCGGTTCATCGCCAGGGCCCTGAGTGGACGGCTGCGCCTCG
GGTTGGCTGAGCAGTCGGTGCTGGCTGCCCTTTCCCAGGCTGTGAGCCTCACACCCCCAGGCCAAGAATTCCCTCCGGCC
GTGGTAGATGCTGGGAAAGGCAAGACCACAGAGGCCAGAAAGACATGGCTAGAGGAGCAAGGCATGATCTTGAAGCAGAC
ATTCTGTGAGGTACCTGACCTGGACCGAATCATCCCTGTGCTGCTGGAGCATGGCCTGGAGCGACTCCCGGAGCACTGCA
GGCTGAGCCCAGGGGTCCCTCTGAAACCTATGTTGGCCCATCCCACTCGGGGTGTCAGTGAGGTCCTGAAACGCTTTGAG
GAGACAGCCTTCACCTGCGAGTACAAATACGATGGGCAGAGGGCACAGATCCATCTTCTAGAAGGCGGGGAGGTGAAGAT
CTTCAGCAGGAATCAGGAAGACAACACGGGGAAGTACCCCGACATCATCAGCCGCATCCCCAAGATTAAACTCCCCTCAG
TCACATCCTTTATCCTGGACACTGAAGCTGTGGCTTGGGACCGGGAAAAGAAGCAGATCCAGCCGTTTCAAGTCCTAACC
ACTCGCAAACGGAAGGAAGTAGATGCTGCAGAAATCCAGGTGCAGGTGTGTCTGTATGCCTTTGACCTCATCTACCTCAA
TGGAGAGTCTCTGGTCCGTGAACCCCTGTCCCAACGCCGGCAGCTGCTCCGGGAGAACTTCGTAGAGACAGAAGGCGAGT
TTGTCTTCGCCACCTCTCTGGACACCAAGGACATGGAGCAGATTGCTGAGTTCTTGGAGCAGTCAGTGAAAGACTCCTGC
GAGGGGCTGATGGTGAAGACCTTGGATGTTGATGCCACCTATGAGATTGCTAAGAGGTCACACAACTGGCTTAAGCTGAA
GAAGGACTACCTTGATGGCGTGGGTGATACCCTGGATCTCGTGGTGATTGGCGCCTACCTGGGCCGGGGAAAGCGAGCCG
GCCGCTATGGGGGTTTCCTGCTGGCTGCCTATGATGAGGAGAGCGAGGAGCTACAAGCCATATGCAAGCTTGGAACGGGC
TTCAGTGATGAGCAGCTGGAAGAGCATTACCAGAGCCTGCAGGCCCTGGTGCTGCCCACCCCACGCCCCTATGTGCGGGC
AGATGGTGCCGTGGCGCCTGACCACTGGCTGGACCCCAGTGCCGTGTGGGAGGTGAAGTGTGCCGATCTCTCTCTCTCCC
CCATCTACCCTGCTGCCCGGGGCCTGGTGGACAGTGAGAAGGGGATTTCCCTCCGCTTCCCTCGGTTTATTCGCGTACGT
GAGGACAAGAAGCCAGAGGAGGCCACTACCAGTGCGCAGGTGGCCTGTCTGTACCGCAAGCAAAGCCAGATTCAGAACCA
AGGCATTGACTCAGACTCTGATGATGAAGAGTTCTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 27 .09 RPM |
| SRP017611_kidney | 74 .33 RPM |
| SRP017611_liver | 32 .73 RPM |
| SRP040447_lung | 45 .83 RPM |
| SRP040447_skeletal_muscle | 24 .79 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_907 | 88.00 | 99.89 | Please wait, loading  |
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| 2. | retro_cpor_914 | 87.47 | 100.00 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000004210 retrocopies