Parental gene: | SLC35E3, ENSCPOG00000004322 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:29848805..29869394(-) |
>ENSCPOG00000004322
ATGGCATCTCTGGCCGAGCGAGTCCGGGGCCACGGGCGAATCGTCGCCGGGCTCCTGTTCAACCTGCTAGTGTCCATCTG
CATCGTGTTCCTCAACAAATGGATCTATGTGCACCACGGCTTCCCCAATATGAGCTTAACCCTGGTGCACTTCGTGGTCA
CCTGGCTGGGCTTATACATCTGCCAGAAGCTGGACATCTTTGCTCCCAAAAGTCTGCCGCCCTCCAAGCTCCTCCTCCTG
GCTCTGAGCTTCTGTGGCTTTGTGGTCTTCACCAACCTCTCGCTGCAGAACAACACCATCGGCACCTATCAGCTGGCGAA
GGCCATGACCACACCGGTGATTATAGCCATCCAGACCCTGTGCTACCAGAAGAGCTTCTCCACCAGGATTCAGCTCACGC
TGATTCCTATAACTTTAGGTGTAATCCTAAATTCTTATTACGATGTGAAGTTTAATTTCCTTGGAATGGTGTTTGCAGCT
CTTGGTGTTTTAGTTACATCTCTTTATCAAGTGTGGGTAGGTGCCAAACAGCATGAGCTGCAAGTCAACTCAATGCAGTT
GCTGTATTACCAGGCTCCAATGTCTTCTGCCATGTTGCTAGTCGCTGTGCCCTTCTTTGAGCCAGTGTTTGGAGAGGGAG
GAATATTTGGTCCCTGGTCCGTCTCTGCTGTGCTTATGGTGCTGCTGTCTGGAGTAATCGCGTTCATGGTGAATTTATCA
ATTTATTGGATCATTGGAAACACATCACCAGTCACATACAACATGTTCGGACACTTCAAGTTCTGCATTACCTTATGTGG
AGGATATGTTTTGTTTAAGGATCCACTGTCAGTTAATCAGGGTCTCGGCATTTTATGTACTTTATTTGGCATTCTCGCCT
ACACTCACTTCAAACTCAGTGAGCAAGAAGGAAGTAAGAGCAAACTTGTACAGCGTCCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 5 .18 RPM |
| SRP017611_kidney | 4 .19 RPM |
| SRP017611_liver | 13 .54 RPM |
| SRP040447_lung | 3 .86 RPM |
| SRP040447_skeletal_muscle | 1 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000031919 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000013347 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000175782 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000012605 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000060181 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005201 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000002545 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_339 | 58.85 | 81.15 | Please wait, loading  |
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| 2. | retro_cpor_1404 | 62.56 | 68.69 | Please wait, loading |
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| 3. | retro_cpor_1487 | 82.26 | 58.79 | Please wait, loading |
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Download FASTA sequences of all ENSCPOG00000004322 retrocopies