Parental gene: | CCDC41, ENSCPOG00000008997 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_9:7018550..7121372(+) |
>ENSCPOG00000008997
ATGGTTTCCAGCTCACTTACCAATATGGACACTTTTACAAATATTTTTCCTCCTGGTGGAGACAGTGGAATAAATTCTGA
GTCTGAGCTCCAAAGAATGTTAGCTGATGAAAGGTTACGATGTGAACATCATAAAACCAATTATCAAACACTAAAAGTTG
AACACACAAGGTTGCAGGACGAGTATATAAAGTCACAAAATGAACTGAAGCGCCTGTCAAATGAAAAACAGACTAACCAG
GAAAAGTTCCAGCTGATGTTTGAAGAGCTAAGAGAAGAATTACTAGCAAAAACTAAAGACTTAGAAGAACTGAAAGGACA
GGTATTAAATCGGCAAAACTTGGAATTGTTAAGAGCCCAGATACAACAAGAGTTAGAAACTCCAATGCGAGAGCGTTGCC
GGAATCTGGATGAAGAAGCGGAAAAGTATAGAACTGAATATAATAAGCTTCGCTATGAACATACATTTCTTAAGTCAGAA
TTTGAACACCAGAAAGAAGAGTTTGCACGTATTTTAGAGGAAGAAAAAATGAAGCATGAATCAGAGGTTGCGAGACTGGA
GAAAGATAAAGAAGAGCTCCATAGCCGGCTGCTCGCTGTTGATCCCACAAGACACATGAAGCGAGTGGAGCAGCTTCTTC
AAGAGAAAGCCCATTTGGGTCAGAAATTAAAAGGGCTAGAGACCGAGGTAGCAGAACTAAGGGCTGAAAAGGAGAATTCT
GGTGCTCAGGTAGAAAGCGTCCAGAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGGTCCCTGGAGGC
TGAAAAACAATCGGTCAAGTTGCAGGCTGAACGCCTGGAAAAAGAGCTGCAATCAACCAGTGAACAAAATATGTCTTTGA
TCAGTAAATTGCATAAAGCTGACCAAGAAATAAGCACGCTGACCAGTACAATAAAGGAGCTGAAACATTCAAAGAAGCTA
GAAATAACAGACATCAAACTGGAGGCAGCGAGAGCTAAGAGTGAGCTGGAAAGAGAAAGAAACAAGATTCAAAGTGAGCT
GGATGGGCTACAGTCAGACAATGAAATTCTCAAATCAGCTGTTGAACACCACAAAACGCTCTTAGTAGAAAAAGATCGTG
AGTTAGTACGTAAAGTACAAGCTGCCAAGGAAGAAGGTTATCAGAAGCTTGTGGTATTACAAGATGAAAAGCTGGAGCTT
GAGAACAGATTAGCAGATTTAGAGAAAATGAAAGTGGAGCACGATATTTGGAGGCAATCTGAGAAGGATCAGCACGAGGA
GAAACTGCGGGCTTCACAGATGGCAGAGGAGGCGGCCCGAAGGGAACTTCAGAGTATTAGGTTAAAACTTCAGCAACAGA
TTGTGAATATTGAAAATGCTGAGAAAGAAAAAAATGAAAATTCTGATCTGAAACAGCAAATCAGTAGCTTGCAGATCCAA
GTAACCTCACTGACTCAGTCTGAGAATGAACTGCTGAATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGGCTGAAGCA
AGAATGCCGTCACTTAAAAAGCCAAGCGGAAAAACTACAGCTAGAAGTTGAAAAGACATTGGAAGAGAAACAGATACAGT
GGTTGGAAGAAAAGCACAAGCTTCAAGAACGTATCACAGACCGAGAAGAAAAGTATAATCAGGCGAAAGAGAAACTACAG
AGAGCTGCAACTGCCCAGAAAAAGAGAAAGTCTCTTCATGAAAACAAACTGAAGCGCCTGCAAGAAAAGGTGGACGTGTT
GGAGGCCAAGAGAGAAGAGTTAGAAGCCGAGAATCAGGTGCTGACCAGACAAAATGTTCCATTTGAAGAATATACGAGAC
TTCAGAAAAGACTGAAGGATATCCAGAGAAGACATAATGAATTTCGAAGTCTGATTTTGGTCCCTAACATTCCTCCACCA
GCATCCATCAATCCCGTTAGCTTTCAGGCGTCAGCCATGGCCCCGGGCGTGGAGCTCTGCTTCCCGCCTCTCGTGCAGGA
GGAACAACATCAAAGAGAACTCTCTCTCCTGCGCAAAAGACTAGAAGAACTAGAAACAACACAGAGAAGACAACTGGAGG
AGCTCGGGTCTCCCGGGGAG
ATGGTTTCCAGCTCACTTACCAATATGGACACTTTTACAAATATTTTTCCTCCTGGTGGAGACAGTGGAATAAATTCTGA
GTCTGAGCTCCAAAGAATGTTAGCTGATGAAAGGTTACGATGTGAACATCATAAAACCAATTATCAAACACTAAAAGTTG
AACACACAAGGTTGCAGGACGAGTATATAAAGTCACAAAATGAACTGAAGCGCCTGTCAAATGAAAAACAGACTAACCAG
GAAAAGTTCCAGCTGATGTTTGAAGAGCTAAGAGAAGAATTACTAGCAAAAACTAAAGACTTAGAAGAACTGAAAGGACA
GGTATTAAATCGGCAAAACTTGGAATTGTTAAGAGCCCAGATACAACAAGAGTTAGAAACTCCAATGCGAGAGCGTTGCC
GGAATCTGGATGAAGAAGCGGAAAAGTATAGAACTGAATATAATAAGCTTCGCTATGAACATACATTTCTTAAGTCAGAA
TTTGAACACCAGAAAGAAGAGTTTGCACGTATTTTAGAGGAAGAAAAAATGAAGCATGAATCAGAGGTTGCGAGACTGGA
GAAAGATAAAGAAGAGCTCCATAGCCGGCTGCTCGCTGTTGATCCCACAAGACACATGAAGCGAGTGGAGCAGCTTCTTC
AAGAGAAAGCCCATTTGGGTCAGAAATTAAAAGGGCTAGAGACCGAGGTAGCAGAACTAAGGGCTGAAAAGGAGAATTCT
GGTGCTCAGGTAGAAAGCGTCCAGAGAATACAGGTGCGGCAGTTGGCTGAGATGCAGGCTACAGTCAGGTCCCTGGAGGC
TGAAAAACAATCGGTCAAGTTGCAGGCTGAACGCCTGGAAAAAGAGCTGCAATCAACCAGTGAACAAAATATGTCTTTGA
TCAGTAAATTGCATAAAGCTGACCAAGAAATAAGCACGCTGACCAGTACAATAAAGGAGCTGAAACATTCAAAGAAGCTA
GAAATAACAGACATCAAACTGGAGGCAGCGAGAGCTAAGAGTGAGCTGGAAAGAGAAAGAAACAAGATTCAAAGTGAGCT
GGATGGGCTACAGTCAGACAATGAAATTCTCAAATCAGCTGTTGAACACCACAAAACGCTCTTAGTAGAAAAAGATCGTG
AGTTAGTACGTAAAGTACAAGCTGCCAAGGAAGAAGGTTATCAGAAGCTTGTGGTATTACAAGATGAAAAGCTGGAGCTT
GAGAACAGATTAGCAGATTTAGAGAAAATGAAAGTGGAGCACGATATTTGGAGGCAATCTGAGAAGGATCAGCACGAGGA
GAAACTGCGGGCTTCACAGATGGCAGAGGAGGCGGCCCGAAGGGAACTTCAGAGTATTAGGTTAAAACTTCAGCAACAGA
TTGTGAATATTGAAAATGCTGAGAAAGAAAAAAATGAAAATTCTGATCTGAAACAGCAAATCAGTAGCTTGCAGATCCAA
GTAACCTCACTGACTCAGTCTGAGAATGAACTGCTGAATTCAAACCAAATGCTGAAGGAAATGGTGGAGAGGCTGAAGCA
AGAATGCCGTCACTTAAAAAGCCAAGCGGAAAAACTACAGCTAGAAGTTGAAAAGACATTGGAAGAGAAACAGATACAGT
GGTTGGAAGAAAAGCACAAGCTTCAAGAACGTATCACAGACCGAGAAGAAAAGTATAATCAGGCGAAAGAGAAACTACAG
AGAGCTGCAACTGCCCAGAAAAAGAGAAAGTCTCTTCATGAAAACAAACTGAAGCGCCTGCAAGAAAAGGTGGACGTGTT
GGAGGCCAAGAGAGAAGAGTTAGAAGCCGAGAATCAGGTGCTGACCAGACAAAATGTTCCATTTGAAGAATATACGAGAC
TTCAGAAAAGACTGAAGGATATCCAGAGAAGACATAATGAATTTCGAAGTCTGATTTTGGTCCCTAACATTCCTCCACCA
GCATCCATCAATCCCGTTAGCTTTCAGGCGTCAGCCATGGCCCCGGGCGTGGAGCTCTGCTTCCCGCCTCTCGTGCAGGA
GGAACAACATCAAAGAGAACTCTCTCTCCTGCGCAAAAGACTAGAAGAACTAGAAACAACACAGAGAAGACAACTGGAGG
AGCTCGGGTCTCCCGGGGAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 6 .96 RPM |
| SRP017611_kidney | 6 .49 RPM |
| SRP017611_brain | 11 .91 RPM |
| SRP040447_lung | 12 .26 RPM |
| SRP040447_skeletal_muscle | 15 .22 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000009750 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000002860 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000007859 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1537 | 93.20 | 68.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000008997 retrocopies