Parental gene:

ENSCPOG00000009142

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_9:42436998..42439630(+)


>ENSCPOG00000009142
CTTCTCTTCTTACCGGCCCCAGGCCCAGCAACCATGGCGGTGGAAGGAGGAATGAAATGTGTCAAGTTCCTGCTCTACAT
TCTTTTGCTGGTGTTCTGCGCCTGTGCAGTGGGATTGATTGCTGTGGGTATAGTGGTCAAGCCTATCCTGAGTGGAACCA
TGAGCCAGGGGGCTACTCCTGGCAGCCTGTTGCCTGTGATCATCATTGCAGTGGGGGCCTTCCTCTTCCTGGTTGCTTTC
ATAGGCTGCTGTGGAGCCTGCAAGGAGAACTACTGTCTCATGATCACTTTTGCCATTTTTCTGACTCTTATCATGCTAGT
GGAGTTGGCCATAGCCATCGCTGGCTATGTTTTTAGAGACAAGGTGAGAGCAGAGTTTAATAAGGACTTCCGACAGCAGA
TGCAGAATTACCCCAAAAACAATGGTACAGCTGCATTTCTAGACAAGTTGCAGACAAAATTTCATTGCTGTGGGGCTGCT
AACTACACAGATTGGGAGAACATCTTTGGCATGGGCAAGGACCGAGTTCCTGACTCCTGCTGTATCAACGTCACCATGGG
CTGTGGCACTGACTTCAAGCTTAATTTTATCAATACTGAGGGCTGTGTGGAGAAGATTGGGAACTGGCTGAGAAGAAATG
TGCTGTTGGTGGCTGCAGCAGCCCTGGGCATTGCTTTTGTTGAGGTCCTGGGAATCATCTTTGCCTGCTGCCTTGTGAAG
AGTATCCGAAGTGGCTATGAAGTGATGTAG

Library Parental gene expression (RPM)
SRP017611_liver 40 .96 RPM
SRP017611_kidney 167 .92 RPM
SRP017611_brain 37 .50 RPM
SRP040447_lung 301 .64 RPM
SRP040447_skeletal_muscle 109 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000011931 ortholog_many2many 1 retrogene
retro_btau_234,
Callithrix jacchus ENSCJAG00000007935 ortholog_one2many 1 retrogene
retro_cjac_4051,
Cavia porcellus ENSCPOG00000000183 within_species_paralog 1 retrogene
retro_cpor_716,
Mus musculus ENSMUSG00000025351 ortholog_one2many 1 retrogene
retro_mmus_1722,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_676 56.12 76.71
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Download FASTA sequences of all ENSCPOG00000009142 retrocopies