Parental gene:

NIPSNAP3B, ENSCPOG00000009373

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_27:25546274..25556686(+)


>ENSCPOG00000009373
CAGGTGTGCTCATCTTTTGCTACAGGGCCCCGACAACAGGATGGAACATTCTATGAATTTCGTACCTGTTATTTTAAGCC
CTCAAAAATGAATGAGTTCCTGGAAAATTTTAAGAAAAATGTTCATCTTCGGACAGCTCACTCTGAATTGGTTGGATTTT
GGAGTGTAGAATTTGGAGGCAGAATTAACAAAGTATTTCATATTTGGAAATACGTTAATTCCTCCCATAAGCGAACTGCA
GTCCGTAAAGCTTTGACCAAAGATAAGGAATGGCAAGAACAATTCCTAGGTCCAAATTTGGCTCACATTGATAAACAAGA
GTGTGAGATTACTTACCTGGTCCCATGGTGCAAAATAGAAAAGCCTACAAAAGAAGGAGTGTATGAACTGGCAACTTTTC
ACATGAAACCTGGTGGTCCAGCTCTGTGGGGTGATGCATTTAAAAGGGCAGTTCATTCTCATGTCAATCGAGGATACACA
AAACTAATTGGTGTTTTCCACACAGAATATGGAACACTCAACAGAGTTCATGTTCTTTGGTGGCATGAGAGTGCTGACAG
TCGTGCAGCTGGGCGACATGAGTCTCACGAGGATCCCCGAGTTGTGGCGGCTGTTCGGGAAAGTGTCAACTACCTGGAAT
CTCAGCAGAATATACTTCTGATTCCTTTATCATTTTCACCATTGAAGTAG

Library Parental gene expression (RPM)
SRP017611_brain 9 .66 RPM
SRP017611_kidney 14 .55 RPM
SRP017611_liver 12 .14 RPM
SRP040447_lung 6 .41 RPM
SRP040447_skeletal_muscle 7 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000014253 possible_ortholog 1 retrogene
retro_acar_133,
Canis familiaris ENSCAFG00000023949 ortholog_one2one 1 retrogene
retro_cfam_295,
Dasypus novemcinctus ENSDNOG00000000943 ortholog_one2one 1 retrogene
retro_dnov_482,
Echinops telfairi ENSETEG00000016120 ortholog_one2one 1 retrogene
retro_etel_1335,
Myotis lucifugus ENSMLUG00000010147 ortholog_one2one 1 retrogene
retro_mluc_924,
Oryctolagus cuniculus ENSOCUG00000007880 ortholog_one2one 1 retrogene
retro_ocun_1385,
Tursiops truncatus ENSTTRG00000012307 ortholog_one2one 1 retrogene
retro_ttru_1702,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_690 58.91 55.02
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Download FASTA sequences of all ENSCPOG00000009373 retrocopies