Parental gene:

BZW1, ENSCPOG00000010449

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_104:912337..922128(-)


>ENSCPOG00000010449
CTAGGGTGTCTTTTTATGAATAATCAAAAGCAGCAAAAGCCAACGCTATCAGGCCAGCGTTTTAAAACCAGAAAAAGAGA
TGAAAAAGAGAGATTTGACCCTACTCAGTTTCAAGACTGTATTATTCAAGGCTTAACTGAAACTGGTACTGATTTGGAAG
CGGTAGCTAAGTTTCTGGATGCGTCTGGAGCAAAGCTTGACTACCGCCGATATGCAGAAACGCTCTTTGACATCCTGGTG
GCTGGTGGAATGCTGGCCCCAGGCGGCACCCTGGCCGACGACATGATGCGCACAGATGTCTGCGTGTTCGCAGCACAGGA
AGACCTGGAGACCATGCAGGCGTTTGCACAAGTTTTTAACAAGTTAATCAGGCGCTACAAATACCTGGAGAAAGGTTTTG
AAGATGAGGTTAAAAAGCTGCTGCTGTTCTTAAAGGGTTTCTCGGAGTCAGAGAGGAACAAGCTGGCCATGCTGACTGGC
GTGCTCCTGGCCAATGGGACGCTCAACGCATCCATCCTCAACAGCCTCTACAATGAGAATCTGGTGAAAGAAGGGGTTTC
AGCCGCGTTCGCTGTGAAGCTCTTTAAGTCCTGGATCAATGAGAAGGACATCAACGCAGTGGCTGCGAGTCTTCGCAAAG
TCAGCATGGATAACAGGCTAATGGAACTTTTTCCTGCCAATAAGCAGAGTGTGGAACACTTCACAAAGTACTTCACGGAG
GCGGGCCTGAAGGAGCTGTCCGAGTACGTCCGGAACCAGCAGACCATCGGTGCCCGGAAGGAGCTCCAGAAGGAGCTTCA
GGAGCAGATGTCCCGTGGCGACCCTTTCAAGGACATAATTTTATACGTCAAGGAGGAGATGAAAAAGAACAACATCCCAG
AACCGGTTGTCATTGGGATCGTCTGGTCGAGTGTGATGAGCACGGTGGAGTGGAACAAAAAAGAGGAGCTCGTAGCAGAG
CAGGCCATCAAGCACTTGAAGCAATACAGCCCTCTGCTCGCCGCCTTCACCACGCAGGGTCAGTCGGAGCTGACTCTGTT
GCTGAAGATTCAGGAGTATTGCTATGACAACATTCACTTCATGAAAGCCTTCCAGAAAATAGTGGTGCTTTTTTACAAAG
CTGAGGTCCTGAGTGAGGAGCCCATTCTGAAGTGGTACAAGGATGCACACATGGCCAAGGGGAAGAGCGTCTTCCTGGAG
CAGATGAAGAAATTCGTGGAGTGGCTCAAGAATGCAGAGGAAGAGTCCGAGTCTGAAGCCGAAGACGGGGACTGA

Library Parental gene expression (RPM)
SRP017611_brain 80 .81 RPM
SRP017611_kidney 109 .40 RPM
SRP017611_liver 66 .90 RPM
SRP040447_lung 131 .43 RPM
SRP040447_skeletal_muscle 50 .91 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000011878 ortholog_one2one 1 retrogene
retro_cfam_2150,
Choloepus hoffmanni ENSCHOG00000003543 possible_ortholog 8 retrogenes
retro_chof_1519, retro_chof_2060, retro_chof_2092, retro_chof_2451, retro_chof_2517, retro_chof_689, retro_chof_726, retro_chof_838,
Homo sapiens ENSG00000082153 ortholog_one2one 2 retrogenes
retro_hsap_2832, retro_hsap_2881,
Gorilla gorilla ENSGGOG00000016296 ortholog_one2one 1 retrogene
retro_ggor_1997,
Mustela putorius furo ENSMPUG00000012344 ortholog_one2one 1 retrogene
retro_mputfur_1174,
Mus musculus ENSMUSG00000051223 ortholog_one2one 3 retrogenes
retro_mmus_2499, retro_mmus_751, retro_mmus_990,
Nomascus leucogenys ENSNLEG00000006929 ortholog_one2one 1 retrogene
retro_nleu_621,
Pan troglodytes ENSPTRG00000012791 ortholog_one2one 1 retrogene
retro_ptro_1949,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_331 77.74 61.79
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Download FASTA sequences of all ENSCPOG00000010449 retrocopies