Parental gene:

UCHL3, ENSCPOG00000012261

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_5:46021332..46073888(-)


>ENSCPOG00000012261
ATGGAGGGTCAGCGCTGGTTGCCGCTGGAGGCCAACCCTGAGGTTACCAACCAGTTTCTCAAACAATTAGGTCTACATCC
TAACTGGCAGTTTGTTGATGTATATGGGATGGATCCTGAGCTCCTTAGCATGGTACCAAGACCAGTCTGTGCAGTGTTAC
TTCTTTTCCCTATTACAGAAAAGTATGAAGTATTCAGAACAGAAGAGGAGGAAAAAATAAAATCCCAGGGACAGGATGTT
ACATCATCAGTGTATTTCATGAAGCAAACCATCAGCAATGCCTGTGGAACAATTGGACTGATCCATGCTATTGCGAACAA
TAAAGACAAAATGCACTTTGTCTGGATCCAACCCTTGAAAAAATTCCTGGAGGAATCTGTGTCAATGAGCCCTGGAGAGC
GAGCCAGATACTTGGAGAACTATGACGCTATTCGAGTTACTCATGAGACCAGTGCCCATGAAGGTCAGACTGAGGCACCA
AATATAGATGAAAAAGTAGATCTTCATTTTATTGCATTAGTTCATGTAGATGGGCATCTCTACGAATTAGATGGGCGGAA
ACCGTTTCCAATTAACCATGGGAAAACTAGTGATGAGACTTTACTAGAGGATGCCATAGAAGTTTGCAAGAAGTTTATGG
AACGTGACCCTGATGAATTAAGATTCAATGCAATTGCTCTTTCTGCAGCATAG

Library Parental gene expression (RPM)
SRP017611_brain 12 .08 RPM
SRP017611_kidney 12 .04 RPM
SRP017611_liver 11 .27 RPM
SRP040447_lung 11 .17 RPM
SRP040447_skeletal_muscle 8 .14 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000024190 ortholog_one2one 1 retrogene
retro_ecab_400,
Myotis lucifugus ENSMLUG00000003442 ortholog_one2many 1 retrogene
retro_mluc_362,
Mus musculus ENSMUSG00000022111 ortholog_one2many 1 retrogene
retro_mmus_177,
Oryctolagus cuniculus ENSOCUG00000006789 ortholog_one2one 1 retrogene
retro_ocun_382,
Otolemur garnettii ENSOGAG00000017114 ortholog_one2one 1 retrogene
retro_ogar_2285,
Rattus norvegicus ENSRNOG00000009530 ortholog_one2many 1 retrogene
retro_rnor_2227,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1217 79.31 99.57
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Download FASTA sequences of all ENSCPOG00000012261 retrocopies