Parental gene:

C11ORF1, ENSCPOG00000021163

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_19:35886270..35890325(-)


>ENSCPOG00000021163
TCTGTTCTTGTCTTTTTCCAGAAACAGAGCCTTGTTCGTTTCCTCACAAACCCACACTATGGAAGCCTCATTAATGCAGA
TGGCCATGGTGAAGTGTGGATAGATTGGAATGATACATCCAAATTTTTCCAATATGGATGGAGATGTACCACTAGTGAGA
ATTCCTATTCTAACCGAACTCTGGTAGGAAACTGGAACCAGGAAAGATATGACCTAAGGAATATTGTGCAGCCCAAACCC
TTGCCTTCTCAGTTTCAACACTACTTTGAAACAACATATGATACAAGCTACAACACCAAATTGCTACTTTCAACCCATAG
ATTTAAGCGAGAGCCTCATTGGTTCCCCGGACATCAACCTGAACTGGACTCTCCTCCAAACAAATGCACAGAAAAGTCAG
TTTATATGAGTAACTATTCAAAGCCTCAAATTAGGCATCACTTGAGCTGTGCATGGGTTGCTAATACTGATCAATCA

Library Parental gene expression (RPM)
SRP017611_brain 2 .53 RPM
SRP017611_kidney 4 .40 RPM
SRP017611_liver 1 .39 RPM
SRP040447_lung 1 .79 RPM
SRP040447_skeletal_muscle 0 .43 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003039 ortholog_one2one 3 retrogenes
retro_chof_1409, retro_chof_1629, retro_chof_888,
Erinaceus europaeus ENSEEUG00000009977 ortholog_one2one 1 retrogene
retro_eeur_658,
Mus musculus ENSMUSG00000037971 ortholog_one2one 1 retrogene
retro_mmus_3061,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_455 68.15 96.86
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Download FASTA sequences of all ENSCPOG00000021163 retrocopies