Parental gene:

QRSL1, ENSCPOG00000021670

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_63:6459454..6486234(+)


>ENSCPOG00000021670
ACAATAAACAGAATTTCAAAGAAAGTTTCTGTGGCACTGAAACAAGGCCAGATTACACCAACAGAGCTGTGTCGGAAATG
TCTCTCCGTTATCCAGAAGACCAAGTTTCTAAATGCTTACATTACTGTGTCATACGAGGTGGCCTTAAAGCAGGCTGAAG
AATCAGAAAAAAGATACAAGAAAGGTCAGTCACTCGGGGAATTAGACGGAATTCCTGTGGCGGTAAAAGACAACTTTAGC
ACAGCTGGCATCGAGACAACGTGTGCATCAAATATGCTGAAAGGTTATATACCACCTTTTAATGCTACAGTAGTTCAGAA
GTTGCTGGATCAGGGAGCTGTACTAATGGGAAAAACAAATTTAGATGAGTTTGCTATGGGGTCTGGAAGCACGGATGGTG
CATTTGGGCCAGTGAAGAACCCCTGGAGTTACTCAAAACAGTACCGAGAACAGAGGCGGCTGCGGTCCCCGGGTGAGCGC
AGGGGTGCGGATGAGGACTGGCTGATCGCAGGAGGAAGCTCGGGCGGGAGCGCGGCTGCGGTGGCGGCGGCCACCTGCTT
TGCGGCTTTAGGATCAGACACTGGAGGATCAACCCGAAATCCTGCCGCCCACTGTGGGCTGGTCGGTTTTAAGCCCAGCT
ATGGTTTAGTCTCCCGTTATGGTCTCATTCCCCTGGTGAATTCCATGGATGTGCCAGGAATCTTAACCAGATGTGTGGAC
GATGCAGCAGCTGTATTGGGTGTACTGGCTGGACATGACCCCAAAGATTCTACCACGGTGCAGGATCCAGTTAAACCATT
TGTGCTTCCTAGTTTGACAGATGTGAGCAAACTGTGCGTAGGAATTCCAAAGGAATATCTCGTACCTGAGTTATCCAGTG
AAGTACGATCTCTCTGGTCCAAAGCTGCTGGCCTCTTTGAGTCTGCGGGAGCCAAGGTGATTGACGTATCCCTGCCTCAC
ACCTCGTACTCAATCGTCTGCTACCATGTACTGTGCACATCAGAAGTGGCATCAAACATGGCAAGATTTGATGGGCTAGA
ATATGGTCATAGATGTGACATTAATGAGTCTACTGAAGCCATGTATGCTGCCACCAGGCGGGAAGGGTTCAATGATGTCG
TCAGAGGAAGAATTCTTTCAGGAAACTTTTTCTTATTAAAAGAAAACTATGAAAATTATTTCATCAAAGCCCAGAAAGTG
AGGCGCCTCATCGCAAATGATTTTGTGAATGTCTTTAACTCTGGAGTGGACGTTGTACTGACCCCCACCACCCTGAGTGA
GGCAGTACCATTCTTGGAATTTATCAAAGAAGACAACAGAACTCGGAGTGCCCAAGATGATATTTTCACCCAGGCGGCCA
ACATGGCAGGGGTGCCCGCTGTGAGCGTGCCAGCCGGTCTCTCACCCCAGGGACTGCCGATCGGCCTGCAGTTCATCGCA
CCTGCCTTTGGTGACCAGAAGCTTCTGACAGTTGCCAAATGGTTTGAGAAACAAATACAGTTTCCAGTTACTCAGCTTCA
AGAACTCACAGAGGATTGTCCATCAGGCTTTGAAAATGACAACTCAGCTTCCGTTTTTCTGAAACAGTGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 12 .77 RPM
SRP017611_kidney 23 .66 RPM
SRP017611_liver 8 .36 RPM
SRP040447_lung 11 .83 RPM
SRP040447_skeletal_muscle 14 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017557 ortholog_one2one 3 retrogenes
retro_btau_476, retro_btau_493, retro_btau_616,
Choloepus hoffmanni ENSCHOG00000001036 ortholog_one2one 1 retrogene
retro_chof_2382,
Callithrix jacchus ENSCJAG00000006200 ortholog_one2one 4 retrogenes
retro_cjac_1421, retro_cjac_3781, retro_cjac_3919, retro_cjac_692,
Homo sapiens ENSG00000130348 ortholog_one2one 3 retrogenes
retro_hsap_1321, retro_hsap_466, retro_hsap_514,
Gorilla gorilla ENSGGOG00000008261 ortholog_one2one 3 retrogenes
retro_ggor_1031, retro_ggor_445, retro_ggor_474,
Macaca mulatta ENSMMUG00000008330 ortholog_one2many 2 retrogenes
retro_mmul_429, retro_mmul_675,
Nomascus leucogenys ENSNLEG00000013383 ortholog_one2one 2 retrogenes
retro_nleu_1403, retro_nleu_1550,
Pongo abelii ENSPPYG00000016883 ortholog_one2one 3 retrogenes
retro_pabe_1100, retro_pabe_230, retro_pabe_268,
Pan troglodytes ENSPTRG00000018462 ortholog_one2one 2 retrogenes
retro_ptro_351, retro_ptro_902,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_179 72.10 98.68
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Download FASTA sequences of all ENSCPOG00000021670 retrocopies