Parental gene:

TADA1, ENSCPOG00000025598

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_39:4058269..4067995(-)


>ENSCPOG00000025598
AGATACTGGGCTAACTTAAAGTTGTGGTTCAAGCAGAAGATCAGCAAGGAAGAGTTTGACCTGGAAGCTCATAGACTTCT
CACACAGGACAATGTTCATTCTCACAATGATTTCCTCCTGGCCATTCTCACGCGTTGTCAGATTTTGGTTTCTACACCAG
AAGGTGCTGGATCTTTGCCCTGGACTGGGGGCTCTGCAGCCAAACCTGGAAAACCCAAGGCCAAGAAAAAGCTTTCTTCC
GTTCGTCAGAAATTTGATCATAGATTCCAGCCTCAGAATCCCCTCTCTGGAGCTCAGCAGTTTGTGGCCAAGGATCCCCA
AGACGACGACGACCTGAAGCTGTGCTCCCACACAATGATGCTCCCCACCCGAGGTCAGCTGGAGGGGAGGATGATAGTGA
CTGCCTACGAGCATGGGCTGGACAATGTGACCGAGGAGGCCGTGTCAGCTGTGGTCTACGCGGTGGAGAATCACCTTAAA
GATATATTGACCTCAGTTGTGTCCAGAAGGAAAGCCTATCGGTTACGAGACGGGCATTTTAAATACGCCTTTGGAAGTAA
TGTCATCCCACAGCCTTACCTGAAGAACAGTGTGGTAGCTTACAACAACTTAATAGAAAACCCTCCAGCCTTTTCTGCTC
CCTTTGCGGGTCAGAATCCGTCTTCTCACCCACCCCCTGATGATGCTGAGCAGCAGGCTGCACTCTTGCTGGCTTGCTCT
GGGGATACACTGCCTGCATCTCTGCCTCCAGTGAACATGTATGACCTTTTTGAAGCTTTGCAGGTACACAGGGAAGTCAT
TCCTACACATACTGTGTATGCCCTTAACATCGAAAGAATCATCATGAAACTCTGGCACCCAAATCACGAAGAGCTGCAGC
AAGACAAAATCCACCGCCAGCGCTTGGCAGCCAAGGAAGGGCTTTTGCTCTGCTGA

Library Parental gene expression (RPM)
SRP017611_liver 3 .96 RPM
SRP017611_kidney 11 .20 RPM
SRP017611_brain 10 .81 RPM
SRP040447_lung 12 .61 RPM
SRP040447_skeletal_muscle 6 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000015607 ortholog_one2one 1 retrogene
retro_cfam_849,
Choloepus hoffmanni ENSCHOG00000012658 ortholog_one2one 1 retrogene
retro_chof_602,
Dasypus novemcinctus ENSDNOG00000018606 ortholog_one2one 1 retrogene
retro_dnov_1293,
Homo sapiens ENSG00000152382 ortholog_one2one 1 retrogene
retro_hsap_3928,
Gorilla gorilla ENSGGOG00000008168 ortholog_one2one 1 retrogene
retro_ggor_2644,
Mus musculus ENSMUSG00000026563 ortholog_one2one 1 retrogene
retro_mmus_865,
Otolemur garnettii ENSOGAG00000007621 ortholog_one2one 1 retrogene
retro_ogar_1989,
Pongo abelii ENSPPYG00000000557 ortholog_one2one 1 retrogene
retro_pabe_3243,
Pan troglodytes ENSPTRG00000001627 ortholog_one2one 1 retrogene
retro_ptro_2671,
Tupaia belangeri ENSTBEG00000007283 ortholog_one2one 1 retrogene
retro_tbel_3501,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1225 80.35 55.63
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Download FASTA sequences of all ENSCPOG00000025598 retrocopies