Parental gene: | MRPL49, ENSDNOG00000004494 |
| Aliases: | None |
| Description: | mitochondrial ribosomal protein L49 [Source:HGNC Symbol;Acc:1176] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_4026:129261..130166(+) |
>ENSDNOG00000004494
AGCCAGACCCAGGGGCCTCCTGATTACACCAGTTTTGTGGAGTCTGTGCACGAATACCAGTTTGTGGAGCGCCTTATACC
CCCAACCAGCATTCCAAAGCCCCCAAAGCATGAACAGTATTCCACCCCCAGTGGCTGGCAGCCCCCGCAGGACACCCCAC
CCAACCTGCCTTATTTCGTGCGGCGCTCTCGGATGCATAACATTCCTGTCTACAAGGATATCACACATGGCAACCGTCAG
ATGACAGTGATCCGGAAGGTGGAGGGCGACATCTGGGCCCTGCAGAAGGATGTGGAGGATTTTCTGAGCCCACTGCTGGG
GAAGACACCTGTTACCCAGGTCAACGAGGTAACAGGTACCCTGCGGGTCAAGGGCTACGTTGATCAGCAGCTCAAAGCTT
GGCTCCTGGAGAAGGGCTTCTGA
AGCCAGACCCAGGGGCCTCCTGATTACACCAGTTTTGTGGAGTCTGTGCACGAATACCAGTTTGTGGAGCGCCTTATACC
CCCAACCAGCATTCCAAAGCCCCCAAAGCATGAACAGTATTCCACCCCCAGTGGCTGGCAGCCCCCGCAGGACACCCCAC
CCAACCTGCCTTATTTCGTGCGGCGCTCTCGGATGCATAACATTCCTGTCTACAAGGATATCACACATGGCAACCGTCAG
ATGACAGTGATCCGGAAGGTGGAGGGCGACATCTGGGCCCTGCAGAAGGATGTGGAGGATTTTCTGAGCCCACTGCTGGG
GAAGACACCTGTTACCCAGGTCAACGAGGTAACAGGTACCCTGCGGGTCAAGGGCTACGTTGATCAGCAGCTCAAAGCTT
GGCTCCTGGAGAAGGGCTTCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 9 .14 RPM |
| SRP012922_cerebellum | 8 .11 RPM |
| SRP012922_heart | 7 .19 RPM |
| SRP012922_kidney | 12 .32 RPM |
| SRP012922_liver | 3 .10 RPM |
| SRP012922_lung | 13 .59 RPM |
| SRP012922_quadricep_muscle | 6 .06 RPM |
| SRP012922_spleen | 12 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000012855 | ortholog_one2one | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000003613 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000149792 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000009437 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000016604 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018778 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005505 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000014882 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000003867 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000007929 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1396 | 58.18 | 77.86 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_dnov_1488 | 70.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_dnov_1941 | 97.18 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_dnov_2272 | 59.09 | 77.86 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_dnov_2473 | 55.46 | 84.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_dnov_2686 | 51.72 | 82.14 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000004494 retrocopies