Parental gene:

FGFR1OP2, ENSDNOG00000006966

Aliases:None
Description:FGFR1 oncogene partner 2 [Source:HGNC Symbol;Acc:23098]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_1840:71596..84270(+)


>ENSDNOG00000006966
ATGAGTTGCACAATTGAGAAGGCACTTGCCGATGCTAAAGCTCTTGTTGAAAGATTGAGAGATCACGATGATGTAGCAGA
ATCTCTTATCGAGCAAACCACCGCTCTCAACAAGCGAGTAGAAGCCATGAAACAGTATCAGGAAGAAATTCAAGAACTTA
ATGAAGTTGCAAGACATCGGCCACGGTCCACATTGGTCATGGGTATACAGCAAGAAAACAGACAAATCAGAGAATTGCAG
CAAGAGAATAAAGAATTGCGTACATCCCTGGAAGAACATCAGTCTGCCTTGGAACTTATAATGAGCAAGTATCGAGAACA
AATGTTTAGATTGTTAATGGCTAGCAAAAAAGATGATCCGGGTATAATAATGAAGTTAAAAGAGCAGCATTCCAAGATTG
ACATGGTACATCGTAACAACTCCGAAGGATTCTTCCTTGATGCATCTCGACACATCCTTGAAGCACCTCAACATGGACTG
GAGAGGAGACACTTGGAAGCAAATCACAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGAAAACAAAGGCT
TGAGAGAGATCCTTCAAATAACTCGAGAATCCTTTTTGAACCTGAGGAAAGACGATGCGTCAGAAAGTACGTCTTTGTCT
GCATTAGTGACCAATAGTGACCTGAGTCTGAGGAAGAGCTGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 10 .11 RPM
SRP012922_cerebellum 8 .52 RPM
SRP012922_heart 1 .16 RPM
SRP012922_kidney 3 .01 RPM
SRP012922_liver 3 .10 RPM
SRP012922_lung 6 .72 RPM
SRP012922_quadricep_muscle 3 .81 RPM
SRP012922_spleen 16 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000016890 ortholog_one2one 1 retrogene
retro_ecab_988,
Homo sapiens ENSG00000111790 ortholog_one2one 1 retrogene
retro_hsap_994,
Loxodonta africana ENSLAFG00000012476 ortholog_one2one 1 retrogene
retro_lafr_486,
Monodelphis domestica ENSMODG00000016618 ortholog_one2many 2 retrogenes
retro_mdom_1788, retro_mdom_244,
Mus musculus ENSMUSG00000040242 ortholog_one2one 2 retrogenes
retro_mmus_3669, retro_mmus_720,
Pongo abelii ENSPPYG00000004375 ortholog_one2one 1 retrogene
retro_pabe_839,
Pan troglodytes ENSPTRG00000004783 ortholog_one2one 1 retrogene
retro_ptro_756,
Tupaia belangeri ENSTBEG00000011581 ortholog_one2one 2 retrogenes
retro_tbel_3732, retro_tbel_4608,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_2342 89.41 66.80
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2. retro_dnov_2594 88.24 66.80
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Download FASTA sequences of all ENSDNOG00000006966 retrocopies