Parental gene: | DEPDC7, ENSDNOG00000012405 |
| Aliases: | None |
| Description: | DEP domain containing 7 [Source:HGNC Symbol;Acc:29899] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_2429:4671..151328(+) |
>ENSDNOG00000012405
AAGACCGCTGCACCGAAGGCGGACACGCCGAGCCCCTCTGCCCTCTGCCCCAAGCCTCCGGNNNNNNNTGTGGCCCAGAA
GCCATTTGGAGCCACATATATATGGAGCAGCATTATAAGCACCCTTCACGCACAGGTGGAAGTGAAGAGACGAAGGCACC
ATTTAAAACGGCACAATGACTGCTTTGTTGGTTCAGAAGCTGTGGATGTCATTTTTTCTCACCTAATTCAGAATAAGTAT
TTTGGTGATGTAGATATTCCTCGGGCCAAAGTGGTGAAAGTGTGTCAAGCACTTATGGACTACAAAGTGTTTGAAGCAGT
TCCAACCAAAGTCTTTGGAAAAGACAAAAAACCTACATTTGAAGATAGTAGTTGCAGCCTTTATAGGTTTACCACAATAC
CTGACCAAGACAGTCAGTTAGGCAAAGAGAACAAACTATATTCACCTTCCAGGTATGCAGAAGCATTATTTAAGTCATCT
GATTTGAAATCAGCAAGTTTAGATCTGTGGAAAAATCTGAGTTTAAAGCCAGCTAACTTCCCTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTTATTGGTGAAGTATGGCGAGAGGAAACAATTGGGCGCCTACTACAACTTGTAGACCTTCCAC
TTCTTGAGTCCTTACTCAGACAGCAAGAGGTTGTACCTAAAGTTCCTCAACCCAAGAGGCCTCCTGACTTGATCTACGAT
AGTAGCTATCTGGATCGAGGGATTCTCAAGGCTTATAGCGACTCTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNTGAATGGGAAGACTGAAATAGCATTAGAAGCTACTCAGCTCTTTCTAAAGCTTTTGGAGTC
TCAAAAGAGAGAAGAATTTAGAAGACTACTGTATTTCATGGCTGTTGCAGCACATCCTTCTGAATTTAAATTACAGAAAG
AAAGTGACAACCGCATAGATGTGAAAAGGATATTCTCGAAAGCCATCATAGACAATAAAAATGTATCCAAAGGCAAAACT
GATCTTCTAGTACTCTTTTTAATTGATCATCAAAAAGATGTTTTTAAGATTCCTGGAACTCTACATAAAATTGTTAGTGT
TAAGCTCATGGCCATGCAGAAGGGAAGAGATCCAAACAGAGACACAGAATGTATTTATTACCAGAAAAATGACTATTTTG
ACAATTCACAGAAGACAATTAAAGATAAGCTGTTGAATTTACTAAAAATTATTGATGAGGATTCAGTACTATCTGCCAAA
GAGAAGAAAAGGCTAGGTCAATTCAATTATCACCCAAACATTTTTATGGAGTTTTTTAGAGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 3 .11 RPM |
| SRP012922_cerebellum | 0 .14 RPM |
| SRP012922_heart | 0 .00 RPM |
| SRP012922_kidney | 3 .01 RPM |
| SRP012922_liver | 8 .98 RPM |
| SRP012922_lung | 0 .15 RPM |
| SRP012922_quadricep_muscle | 0 .17 RPM |
| SRP012922_spleen | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000017093 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000008704 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009718 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1210 | 85.21 | 50.90 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSDNOG00000012405 retrocopies