Parental gene: | ZNRD1, ENSDNOG00000015720 |
| Aliases: | None |
| Description: | zinc ribbon domain containing 1 [Source:HGNC Symbol;Acc:13182] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_56689:4319..9362(+) |
>ENSDNOG00000015720
CCGTCCATCATGGATCCCGCCGAGACCGGCTCCAGCTTCCAGTCGGACCTCGACTTCTGCCCGGACTGCGGCTCGGTGCT
GCCTCTGCCCGGGGCTCAGGATTCGGTCATCTGCACTCGCTGTGGCCTCTCCATCAACGTGCGGGACTTCGAAGGGAAGG
TGGTGAAGACCTCCTTTGTGTTCCACAAACTGGGAACAGCCGTGCCTGCGGCGGTGGAGCAAGGACCCGAGTTCCAGGGG
CCCGTGGTTGACAGACGCTGTCCTCGATGTGGTCATGAGGGAATGGCATACCACACCAGACAGATGCGCTCAGCGGATGA
AGGGCAGACTGTCTTCTACACCTGTACCAACTGCAGGTTCCAGGAGAAGGAAGACTCTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 35 .00 RPM |
| SRP012922_cerebellum | 23 .64 RPM |
| SRP012922_heart | 18 .79 RPM |
| SRP012922_kidney | 38 .33 RPM |
| SRP012922_liver | 21 .83 RPM |
| SRP012922_lung | 34 .36 RPM |
| SRP012922_quadricep_muscle | 23 .71 RPM |
| SRP012922_spleen | 42 .81 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000007328 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000007272 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016023 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000007474 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000000779 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000009716 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000001554 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_933 | 63.54 | 73.02 | Please wait, loading  |
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| 2. | retro_dnov_1020 | 74.62 | 98.41 | Please wait, loading |
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| 3. | retro_dnov_1103 | 62.99 | 98.41 | Please wait, loading |
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| 4. | retro_dnov_1472 | 73.02 | 97.62 | Please wait, loading |
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| 5. | retro_dnov_1726 | 67.20 | 97.62 | Please wait, loading |
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| 6. | retro_dnov_1798 | 66.67 | 83.33 | Please wait, loading |
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| 7. | retro_dnov_1881 | 65.08 | 97.62 | Please wait, loading |
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| 8. | retro_dnov_2400 | 71.30 | 88.10 | Please wait, loading |
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| 9. | retro_dnov_2420 | 63.73 | 78.57 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000015720 retrocopies