Parental gene:

RPL36AL, ENSDNOG00000015954

Aliases:None
Description:ribosomal protein L36a-like [Source:HGNC Symbol;Acc:10346]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2694:55856..58883(+)


>ENSDNOG00000015954
ATGGTGAATGTTCCTAAAACCCGCCGAACTTTCTGTAAGAAGTGCGGCAAGCATCAACCCCACAAAGTGACACAGTACAA
GAAGGGCAAGGATTCTCTATATGCCCAGGGAAAGCGGCGTTATGACAGGGAACAGAGTGGTTACGGTGGGCAGACTAGGC
CAATTTTCCGGGAAAAGGCTAAAACTACAAAGAAGATTGTGCTGAGGCTCGAATGTGTTGAGCCCAATTGCAGATCTAAG
AGGATGTTGGCTATTAAGAGATGCAAACACTTTGAACTAGGAGGCGACAAGAAGAGAAAGGGCCAAGTGATCCAGTTCTA
A

Library Parental gene expression (RPM)
SRP012922_ascending_colon 133 .99 RPM
SRP012922_cerebellum 71 .35 RPM
SRP012922_heart 65 .66 RPM
SRP012922_kidney 149 .22 RPM
SRP012922_liver 64 .09 RPM
SRP012922_lung 157 .00 RPM
SRP012922_quadricep_muscle 81 .35 RPM
SRP012922_spleen 200 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000015397 possible_ortholog 3 retrogenes
retro_fcat_106, retro_fcat_25, retro_fcat_80,
Gorilla gorilla ENSGGOG00000009460 possible_ortholog 6 retrogenes
retro_ggor_13, retro_ggor_152, retro_ggor_207, retro_ggor_208, retro_ggor_42, retro_ggor_5,
Monodelphis domestica ENSMODG00000025578 possible_ortholog 2 retrogenes
retro_mdom_1878, retro_mdom_971,
Pteropus vampyrus ENSPVAG00000001569 possible_ortholog 1 retrogene
retro_pvam_17,
Rattus norvegicus ENSRNOG00000011494 possible_ortholog 1 retrogene
retro_rnor_259,
Sorex araneus ENSSARG00000014178 ortholog_one2one 4 retrogenes
retro_sara_146, retro_sara_488, retro_sara_617, retro_sara_76,
Tursiops truncatus ENSTTRG00000012779 ortholog_one2many 1 retrogene
retro_ttru_5,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_227 63.81 98.11
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2. retro_dnov_233 66.98 100.00
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3. retro_dnov_243 75.93 100.00
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4. retro_dnov_310 70.71 92.45
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5. retro_dnov_596 58.49 98.11
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6. retro_dnov_699 87.74 100.00
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7. retro_dnov_871 70.09 100.00
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8. retro_dnov_936 72.90 100.00
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9. retro_dnov_1206 80.19 100.00
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10. retro_dnov_1266 62.24 89.62
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11. retro_dnov_1320 81.90 99.06
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12. retro_dnov_1328 68.87 100.00
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13. retro_dnov_1330 72.12 97.17
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14. retro_dnov_1392 80.19 100.00
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15. retro_dnov_1427 83.51 91.51
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16. retro_dnov_1525 66.67 79.25
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17. retro_dnov_1799 75.45 100.00
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18. retro_dnov_1898 58.88 99.06
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19. retro_dnov_2302 61.68 99.06
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20. retro_dnov_2371 59.81 99.06
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21. retro_dnov_2488 80.00 80.19
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22. retro_dnov_2503 64.47 70.75
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23. retro_dnov_2587 62.62 100.00
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Download FASTA sequences of all ENSDNOG00000015954 retrocopies