Parental gene: | TRAPPC3, ENSDNOG00000019015 |
| Aliases: | None |
| Description: | trafficking protein particle complex 3 [Source:HGNC Symbol;Acc:19942] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | scaffold_27275:5744..8757(+) |
>ENSDNOG00000019015
AGCTCTGAGCTCTTCACCCTGACCTATGGAGCTCTGGTCACCCAGTTATGCAAGGACTATGAAAATGATGAAGATGTGAA
TAAACAGCTGGACAAAATGGGCTATAACATTGGAGTCCGACTGATTGAAGATTTCTTGGCACGGTCAAATGTTGGAAGGT
GCCATGACTTTCGGGAAACTGCGGATGTCATTGCCAAGGTGGCATTTAAGATGTACTTGGGCATCACGCCAGGCATCACC
AATTGGAGCCCAGCTGGTGACGAATTCTCCCTCATTTTGGAAAATAACCCCTTGGTGGACTTTGTGGAACTTCCTGATAA
CCACTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCCAGATGGCTGTGGAGG
CCAAGTTTGTCCAGGATACCCTGAAAGGGGATGGTGTGACAGAAATCCGGATGAGGTTCATCAGGCGGATTGAGGACAAT
CTCCCAGCTGGAGAGGAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 13 .81 RPM |
| SRP012922_cerebellum | 30 .24 RPM |
| SRP012922_heart | 10 .21 RPM |
| SRP012922_kidney | 26 .28 RPM |
| SRP012922_liver | 18 .89 RPM |
| SRP012922_lung | 30 .54 RPM |
| SRP012922_quadricep_muscle | 3 .46 RPM |
| SRP012922_spleen | 25 .64 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Macropus eugenii | ENSMEUG00000013169 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000002140 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_955 | 89.32 | 62.05 | Please wait, loading  |
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| 2. | retro_dnov_1727 | 86.36 | 65.66 | Please wait, loading |
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Download FASTA sequences of all ENSDNOG00000019015 retrocopies