Parental gene: | SART1, ENSDNOG00000024688 |
| Aliases: | None |
| Description: | squamous cell carcinoma antigen recognized by T cells [Source:HGNC Symbol;Acc:10538] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_6005:13084..26628(+) |
>ENSDNOG00000024688
AAAGCGGATACGACGGTGACCGTCACCGTGAGCCCCCCGGAGCAGCCGCCGCGACACCGTGATCACAAGAAGCTCAAGTA
CCGGGATGGCGGCGGGTGCAGCAGCGGCGGCGTACGACGCAAGCGGAGCCGGGAGCGCGTGGCCGAGAGCGGAGGCGGGC
GGCGCGGGGCCGAGACCGAGGCCCCGGGCGGCGCGCACGGGCGGGAGCGGGTCCAGGCGGAGCCCTCCGAGCGGCGCGTG
AAGCGGGAGAAGCGCGATGACGGCTACGAGGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTAAACTCCGGGCAAAGTTGGGGCTGAAACCTTTGGAGGTCAATGCTGTCAAGAAGGAGGCGGGCACCA
AGGAGGAGCCCGTGGCCGCAGACATCATCAACCCCATGGCCTTGCGGCAGCGAGAGGAGCTGCGGGAGAAGCTGGCGGCT
GCCAAGGAAAAGCGCCTGCTGAACCAAAAGCTGGGGAAGATAAAGACGTTGGGGGAGGATGACCCCTGGCTGGATGATAC
CGCGGCCTGGATCGAGAGGAGCCGGCAGCTGCAGAAGGAGAAGGACTTGGCAGAGAAGAGGGCCAAGCTGCTGGAAGAGA
TGGACCAAGAGTTCGGCGTCAGCACACTGGTGGAGGAAGAGTTTGGGCAGAGGCGGCAGGACCTGTACAGTGCCCGGGAC
CTGCAGGGCCTCACCGTGGAGCACGCCATCGATTCCTTCCGAGAAGGGGAGACCATGATCCTCACCCTCAAGGACAAAGG
CGTGCTGCAGGAGGAGGAGGATGTGCTGGTGAACGTGAACCTGGTGGACAAGGAGCGGGCAGAGAAGAACGTGGAGCTGC
GGAAGAAGAAGCCCGACTACCTGCCCTACGCCGAGGACGAGAGCGTGGATGACTTGGCACAGCAAAAACCCCGCTCCATC
CTGTCAAAGTATGACGAGGAGCTCGAGGGGGAGCGGCCCCACTCCTTCCGTTTGGAGCAGGGTGGCATGGCTGATGGCCT
GCGGGAGAGGGAGCTGGAAGAGATCCGGACCAAGCTGCGCCTACAGGCTCAGTCCCTGAGCACAACGGGGCCCCGGCTCG
CCTCTGAGTACCTCACACCCGAGGAGATGGTGACCTTTAAAAAGTCCAAGCGGAGGGTGAAGAAAATCCGCAAGAAGGAG
AAGGAGGTGGTGGTGCGGGCCGATGACCTGCTGCCTCTCGGGGACCAGACTCAAGACGGGGACTTTGGCTCCAGATTGCG
GGGCCGGGGCCGGCGCCGAGTGCCCGAGGCGGAGGAGGAAAAGGAGCAGCCAGTGCCTCAGCCCCCCCAGTCGGACGACA
CCCGCTTGGAGAACATGGACATCAGTGACGAAGAGGAGGGTGGAGTTCCGCGATCTGGGTCACCAGAAGTGCTGGAGGAG
GACGAGGCAGAGCTGGAGCTACAGAAGCAGCTGGAGAAAGGGCGCCGGCTGCGGCAGCTCCAGCAGCTGCGGGACAGTGG
CGAGAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCTGGGAGGAGGACGAGGACCCTGAGCGGAAGG
GGGCCATCGTGTTCAATGCCACCTCGGAGTTCTGCCAGACGCTGGGGGAGATCCCCACCTATGGGCTGGCCGGCAACTGG
GAGGAGCAGGAGGAGCCAATGGACTTGGAGCGGGATGAGGAGCGCTCGGCCAACGGCGGCTCCGAATCCGATGAGGAGGA
GAACATCGGCTGGAGCACGGTCAACCTGGACGAGGAGAAGCAGCAGCAGGACTTCTCTGCCTCCTCCACCACCATCCTGG
ACGAGGAGCCCATCATGAACCGAGGGCTGGCAGCTGCCCTGCTCCTGTGTCAGAACAAAGGGCTGCTGGAGACCACGGTG
CAGAAGGTGGCCCGGGTGAAGGCACCCAACAAGTCGCTGCTGTCCACCGTGTACTGCATCGAGGACAAGATGGCCATCGA
CGACAAGTACAGCCGGCGGGAGGAGTACCGCGGCTCCACCCAGGACTTCAAGGAAAAGGACGGCTACAAGCCCGACGTCA
AGATCGAGTATGTGGACGAGACGGGCTGCAAGCTCACGCCCAAGGAGGCTTTCCGGCAGCTGTCCCACCGCTTCCACGGC
AAGGGCTCAGGCAAGATGAAGACTGAGCGGCGGATGAAGAAGCTGGACGAGGAGGCACTGCTGAAGAAGATGAGCTCCAG
CGACACGCCCCTGGGCACCGTGGCCTTGCTGCAGAAGAAGCAGAAGCGGAAGACCCCGTACATCGTGCTCAGTGGCAGCG
GCAAGAGCATGAACGCGAACACCGTCACCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 39 .28 RPM |
| SRP012922_cerebellum | 55 .40 RPM |
| SRP012922_heart | 11 .83 RPM |
| SRP012922_kidney | 27 .93 RPM |
| SRP012922_liver | 22 .76 RPM |
| SRP012922_lung | 45 .21 RPM |
| SRP012922_quadricep_muscle | 19 .73 RPM |
| SRP012922_spleen | 51 .62 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_2429 | 88.78 | 50.38 | Please wait, loading  |
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Download FASTA sequences of all ENSDNOG00000024688 retrocopies