Parental gene:

SFR1, ENSECAG00000005386

Aliases:None
Description:SWI5-dependent recombination repair 1 [Source:HGNC Symbol;Acc:29574]
Organism:Horse (Equus caballus)
Coordinates:1:26235875..26239533(-)


>ENSECAG00000005386
ATGGCGGAGGGAGAGGTAAACCAGGATTTCATTTTCAAGATGGAAAGCCCATCAGACTCAGCTGTGATTTCACCTGGCAC
CCCGCAGGCGTGTGCCAGGCCACCGTCTCCCCATACCAGTAGTTCAAGAAAACAACCTATGAGCGCAACACTTAGAGAAC
GATTAAGGAAAACCAGATCTTCATTTAATTCCTGTTACAGTGTGGTGAAACGTCTCAAAGTGGAGAATGAAGGAGATGAT
CAGAACTTTTCAGAGAAACCACCAACTTCAGTAGAAGAAAACTCTGTGGAATTTCGAGAAGATGTTAAACGCATAGACAG
TGAATTTGAAGAAAATACCTCTTTGAAAAATACCTTCAAGGATATCAGTGCGTGTGAGTCTGAGTCACTCCATGCTGGGT
CATGCAGTGAGGATCTCCAAAATGACTTTGTGAATGAGGATCTTCCCAGAGAAGGATTAAATGAAGAAAAAGCAAAATTG
GTGAAGCAGATTCAGGAGAAAGAGGACCTTCTTCGGAGGCTCAAACTAGTCAAAATGTACAGATCAAAGAATGACCTGTC
TCAGTTACAGTTGTTAATAAAGAGGTGGAGAAGCTGTAGCCAGCTGTTGCTTTGCGAGTTGCAGTCAGCTTTGTCCGAGG
AGAACAAGAAACTCAGCCTTACTCAGTTGATAGACTACTATGGCTTAGATGATAAATTGCTACACTATAACAGAAATGAA
GAAGAATTTATATAG

Library Parental gene expression (RPM)
SRP021940_articular_cartilage 1 .71 RPM
SRP021940_cerebellum 0 .21 RPM
SRP021940_embryo 2 .05 RPM
SRP021940_placental_villous 1 .92 RPM
SRP021940_synovial_membrane 1 .02 RPM
SRP021940_testis 1 .47 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000015444 ortholog_one2one 1 retrogene
retro_etel_1418,
Gorilla gorilla ENSGGOG00000025713 ortholog_one2one 1 retrogene
retro_ggor_3039,
Macaca mulatta ENSMMUG00000015327 ortholog_one2many 1 retrogene
retro_mmul_2606,
Pteropus vampyrus ENSPVAG00000004202 ortholog_one2one 1 retrogene
retro_pvam_742,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ecab_726 77.27 97.95
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2. retro_ecab_887 67.44 86.89
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Download FASTA sequences of all ENSECAG00000005386 retrocopies