Parental gene: | ENSECAG00000010589 |
| Aliases: | None |
| Description: | None |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 16:6715758..6741014(-) |
>ENSECAG00000010589
CAGGTGCCCATGGCGTCGGAGCGGCGCAAGGTCAAGTACCACTGGAGTAGCACTTCGGGAGGGTGTCCCCGCAAGCGCAG
CCGCCCCCGGGAGCCCGGCCATGTGGCCCCCTCCAGCCGGCCCGCTCGCAGCTCTGCGTCGCGGTCAGGAGGGGCCAGCA
GCCCCAAGCGCCTGAAAGCCCAGGAGGACGACGATGTGGCCTGCACGCTGCGGCTGTCCCGGGGCTCATCCCGCCACAGG
AATTCCTCCTCCTCCTCTTCCCAGTCGTCTGGCCCAGGTGTGGGCGGGGCTGCCTCCAGAGGCTGCCTGAGTCGGAGCGC
ACAGGGGTTCCTTTCGTCCAGGGAGTCCCGTCTGGGCCCTGCCAACCCCTCGCTAGAAGAGATGGCTTCTCTAGAGGAGG
GAGCCTGCAGCCTTAAGGTTGATTCCAAAGATAGTTCTCGTAATTCCATGAACTCTGAATTTGCAGCTGAAGCTGAGGGT
CAGAATGAGGTGACTGAGGAACCTAACAAGGTCCAGAAAAGGAAGAGGGATAGACTTCGAGACCAAGGCTCTACCGTGAT
CTACCTGAAGGCTATCCAGGGCATTCTGGGAAAGTCGATGCCAAAAAGGAAGGGAGAGGCTGCCACTAGGGCAAAACCAG
GCCCCGGAGAGCGTCCCAGCTGTGGAGAAGGACCAGCCAGGAGTGTCAGTGTGTCTGCTCCTCAGAAAGAGAGGGAGTCA
GCCCCAGACGTCAGAGCGGAGGAGGAAAAGCCTGTGCTGGAGGGGAGCAGCTTCCGCGACAGGAGAGTGGTGATAGACCC
TCAGGAGAACCCCACTGAGGAGCCACTTGGGGACCGAAGGACAGTCATTGACAAGCGCTCTCCACCCCTAGAGTTTTTGG
ATGACTCTGACTCTCATTTAGAAAGCCAAAAGCCTAAAGAAAGGGAGGTGGTGCTAGAGCACACCTCTTCAGGAAGTGAC
TGGTCCGATGTAGACGAGATCCCCACAGTCAGATTCTCTCAGGAGGAGCCTGTCTCGTTGAAACTCCCAGCAGTTCCAGA
GCCTTCTGCCTTCCCCACTGACTATGTCATGTACCCGGCTCATTTGTACAGTAGTCCTTGGTGTGACTATGCCAGCTATT
GGACCAGCAGTCCCAAGCCTTCCAGCTACCCCTCTGTGGGCAGCGGCAGCGGCAATGACACATCGCAGGCTGGGAGGGGC
AGCCGGGGCCTCCTGAGTGATTATCCTCCCAACTCCACAGTGAGCTCCCACAACGCCTCCCGAGACTTGGTGGCCACAGA
GGAGGGCAGATCCCAGAATTCGCGTTCATCGCGCTTCTCCAGAAGCTCGGAAGAAGAAGAGCTGAAGGAGAGACGGACAT
TCCAGGAGGAGACGCCACTGCGTCCTTGTGGAGGACATGGGTCTAGCTCCCTGCCAAGGAGCCATCGGGAGCCCAGCCCA
GAGGAGGGTTTCATCGATACCCATTGTCACTTGGACATGCTCTATTCCAAGTTGTCTTTCAAAGGGACCTTTACCAAGTT
CAGAAAAATTTATAGCAGCTCCTTCCCTAAGGAATTTCAGGGCTGCATCTCTGACTTCTGCGATCCTCGGACTCTGACAG
ACTGCCTGTGGGAGGAGCTGTTGAAAGAGGATCTGGTTTGGGGGGCCTTTGGCTGTCACCCTCATTTTGCACGTTACTAC
AGTGATGTTCAAGAAAGAAATCTTTTGCAAGCCTTAAGGCACCCCAAAGCTGTGGCATTCGGGGAGATGGGCCTGGATTA
CTCTCACAAGTGCACCACGCCTGTGCCCGAGCAGCACAAGGTGTTTGAGAGACAGCTGCAGCTGGCCGTGTCTCTGAAGA
AGCCCTTGGTGATCCACTGCCGAGAAGCTGACGAAGATCTGCTGAGCATCATGAAAAAATTTGTGCCCTCAGACTACAAG
ATCCATAGGCACTGCTTCACCGGCAGCTACCCGGTCATCGAGCCCCTGCTGGAGCACTTCCCCAACATGTCTGTGGGCTT
CACGGCGGTGCTGACGTACTCCTCTGCCTGGGAGGCCCGGGAGGCCCTGAAGCAGATCCCGCTGGAGAGGATCATCGTGG
AAACTGACGCGCCCTACTTCTTGCCTCGACAGGTTCCCAGAAGCGTCTGCCAGTATGCCCACCCAGGCCTGGCTTTGCAT
ACAGTCCGAGAGATTGCCAGGGTCAAAGATCAGCCACTCTCCCATACTTTGGCCACTCTGCGTGAGAACACCAGTCGCCT
CTACAACCTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_articular_cartilage | 16 .82 RPM |
| SRP021940_cerebellum | 27 .47 RPM |
| SRP021940_embryo | 29 .66 RPM |
| SRP021940_placental_villous | 17 .90 RPM |
| SRP021940_synovial_membrane | 24 .93 RPM |
| SRP021940_testis | 32 .10 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000016012 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000005131 | ortholog_one2one | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000017160 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_1057 | 69.26 | 84.00 | Please wait, loading  |
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Download FASTA sequences of all ENSECAG00000010589 retrocopies