Parental gene: | PNPLA8, ENSECAG00000012878 |
| Aliases: | None |
| Description: | patatin-like phospholipase domain containing 8 [Source:HGNC Symbol;Acc:28900] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 4:8347982..8383608(-) |
>ENSECAG00000012878
ATGTCTATTAATTTGACTGTAGATATATATATTTACCTCCTTAGTAATGCAAGAAGTCTTTATGGGAAGCAAAGGAGCAA
GCAACTGCATTTGTTGTGCTCACCTGAACATTACAGAAGCATAAGCCACATCAGTCTGCAAAGAGCCTTTCACACAAGCA
AAGTAAGATGTAAATGGACCAAAAGTGAAGCACACTCTTGCAGTAAGCACTGTTACTCTCCTAGCGACCATGGTGTACAT
ACTGGAATTTTGAAACTTAGCACCTCTGCTCCCAGGGGACTTACAAAAGTGAGCATTCGTATGTCCCGTATTAAAAGTAC
TTTGAACTCTGTTTCAAAGGCTCTTTTTGGTAAGCAGAATGAAATGATCTCATGTTTAGCTCAATTTAAGCCAAGTTCTC
GAATATTAAGAAAAGTATCAGATAGTGTCTGGTTAAAACAGAAAAACGTTCGACAAGCCATTAAATCTTTGAAAAGATAT
AGTGACAAATCAGAAGAAAAGAGTTCGTTTCCAGAAAAGAAAAGTCACATTATAGATAAAGATAAAGATATAGATAAACA
AAGCCTTTTTCATTACTCAACTAGTATAACCACAAAATTTGGAGAGTCATTCTACTTCTTATCAAATCATATTAATTCAT
ACTTCAAACGTGAGGAGAAAATGTCTCAAAAAAAGGAAAATAAACATTTCCAGGACAACTCAGAACTTGAAGACGAGAAA
TCCAGTTCTCCAGATTCTGGTGTCCTGACTGATGAGAAGCAAGACTCAGAATCTTCTTTACATACTGTGGACAAGCCCTC
AAGTCCCAGTGGGACACCTGAGGTTCTTCCAGTTTCTGCTAAACAGAGTATTGCTAACTTTCTTTCTCGTCCCACTGAAG
GTGTACAAGCTTTAGTAGGTGGTTATATTGGTGGACTCGTCCCCAAGTTAAAGTACAATTCCAAGAGTCAGTCAGAAGAA
CAGGAAGAGGCTGGGAAAGCTGAGCAGGCTGTCAGCAAAGACAAAAATGCAGAGGAGAAAAAGCGTTTGTCTCTTCAGCG
GGAAAAGGCAAGTTATTCAATTATTGCAAGAGTGAGTATTGATAACAGAACCCGGGCATTAGTTCAGGCATTGAGAAGAA
CAACTGACCCAAAGCTCTGCATTAATAGGGTTGAAGAACTGACCTTTCATCTTCTAGAATTTCCAGAAGGAAAAGGAGTA
GCTGTCAAGGAAAAAATTATTCCGTGTTTATTACGATTGCGACAAATTAAGGATGAAACTCTTCAGGCTGCAGTCAGAGA
AATTTTGGCTTTAATCGGCTATGTAGATCCAGTGAAAGGAAGAGGAATCCGAATTCTCGCAATTGATGGTGGAGGAACAA
GGGGTGTGGTTGCTCTTCAGACACTACGAAAATTAGTTGAACTTACTCAGAAGCCAGTCCATCAGCTCTTTGATTACATT
TGTGGTGTAAGCACAGGTGCTATATTAGCATTCATGTTGGGCTTGTTTCATATGCCCCTGGATGAATGTGAGGAACTTTA
TCGAAAATTAGGATCAGATGTGTTTTCACAAAACGTCATTGTTGGAACAGTCAAAATGAGTTGGAGCCATGCATTTTATG
ACAGTCAGACATGGGAAAATATTCTTAAGGATAGAATGGGATCTTCACTAATGATTGAAACAGCAAGAAACCCCACATGT
CCTAAGGTAGCTGCCGTAAGTACCATAGTCAACAGAGGGATAACGCCGAAAGCTTTTGTGTTCAGAAACTATGGTCATTT
TCCTGGTATCAACTCTCACTATTTGGGAGGCTGTCAGTATAAAATGTGGCAAGCCATTAGAGCCTCCTCCGCTGCGCCAG
GCTACTTTGAAGAGTATGCACTGGGCAATGATCTTCATCAAGATGGCGGTTTGCTCCTGAATAACCCTTCAGCATTAGCA
ATGCACGAGTGTAAATGTCTTTGGCCAGACGTCCCCTTGGAGTGCATTGTATCCCTGGGCACTGGGCGGTATGAGAGCGA
CGTGAGAAATGCCGTGACATACACAAGCTTGAAGACCAAGCTGTCGAATGTTATCAACAGCGCTACAGATACGGAAGAAG
TCCATATAATGCTTGACGGTCTGTTACCTCCTGACACCTATTTTAGATTCAATCCTGTAATGTGTGAAAACATACCTCTC
GATGAAAGTCGAAATGAAAAGCTGGATCAGCTGCAGTTGGAAGGGTTGAAGTACATAGAAAGAAATGAAGAAAAGATGAA
AAAACTTGCAAAAATATTAAGTCAAGAAAAAACAACTCTGCAGAAAATTAATGACTGGATAAAACTAAAAACTGACATGT
ATGAAGGCCTTCCATTCTTTTCAAAATTGTGA
ATGTCTATTAATTTGACTGTAGATATATATATTTACCTCCTTAGTAATGCAAGAAGTCTTTATGGGAAGCAAAGGAGCAA
GCAACTGCATTTGTTGTGCTCACCTGAACATTACAGAAGCATAAGCCACATCAGTCTGCAAAGAGCCTTTCACACAAGCA
AAGTAAGATGTAAATGGACCAAAAGTGAAGCACACTCTTGCAGTAAGCACTGTTACTCTCCTAGCGACCATGGTGTACAT
ACTGGAATTTTGAAACTTAGCACCTCTGCTCCCAGGGGACTTACAAAAGTGAGCATTCGTATGTCCCGTATTAAAAGTAC
TTTGAACTCTGTTTCAAAGGCTCTTTTTGGTAAGCAGAATGAAATGATCTCATGTTTAGCTCAATTTAAGCCAAGTTCTC
GAATATTAAGAAAAGTATCAGATAGTGTCTGGTTAAAACAGAAAAACGTTCGACAAGCCATTAAATCTTTGAAAAGATAT
AGTGACAAATCAGAAGAAAAGAGTTCGTTTCCAGAAAAGAAAAGTCACATTATAGATAAAGATAAAGATATAGATAAACA
AAGCCTTTTTCATTACTCAACTAGTATAACCACAAAATTTGGAGAGTCATTCTACTTCTTATCAAATCATATTAATTCAT
ACTTCAAACGTGAGGAGAAAATGTCTCAAAAAAAGGAAAATAAACATTTCCAGGACAACTCAGAACTTGAAGACGAGAAA
TCCAGTTCTCCAGATTCTGGTGTCCTGACTGATGAGAAGCAAGACTCAGAATCTTCTTTACATACTGTGGACAAGCCCTC
AAGTCCCAGTGGGACACCTGAGGTTCTTCCAGTTTCTGCTAAACAGAGTATTGCTAACTTTCTTTCTCGTCCCACTGAAG
GTGTACAAGCTTTAGTAGGTGGTTATATTGGTGGACTCGTCCCCAAGTTAAAGTACAATTCCAAGAGTCAGTCAGAAGAA
CAGGAAGAGGCTGGGAAAGCTGAGCAGGCTGTCAGCAAAGACAAAAATGCAGAGGAGAAAAAGCGTTTGTCTCTTCAGCG
GGAAAAGGCAAGTTATTCAATTATTGCAAGAGTGAGTATTGATAACAGAACCCGGGCATTAGTTCAGGCATTGAGAAGAA
CAACTGACCCAAAGCTCTGCATTAATAGGGTTGAAGAACTGACCTTTCATCTTCTAGAATTTCCAGAAGGAAAAGGAGTA
GCTGTCAAGGAAAAAATTATTCCGTGTTTATTACGATTGCGACAAATTAAGGATGAAACTCTTCAGGCTGCAGTCAGAGA
AATTTTGGCTTTAATCGGCTATGTAGATCCAGTGAAAGGAAGAGGAATCCGAATTCTCGCAATTGATGGTGGAGGAACAA
GGGGTGTGGTTGCTCTTCAGACACTACGAAAATTAGTTGAACTTACTCAGAAGCCAGTCCATCAGCTCTTTGATTACATT
TGTGGTGTAAGCACAGGTGCTATATTAGCATTCATGTTGGGCTTGTTTCATATGCCCCTGGATGAATGTGAGGAACTTTA
TCGAAAATTAGGATCAGATGTGTTTTCACAAAACGTCATTGTTGGAACAGTCAAAATGAGTTGGAGCCATGCATTTTATG
ACAGTCAGACATGGGAAAATATTCTTAAGGATAGAATGGGATCTTCACTAATGATTGAAACAGCAAGAAACCCCACATGT
CCTAAGGTAGCTGCCGTAAGTACCATAGTCAACAGAGGGATAACGCCGAAAGCTTTTGTGTTCAGAAACTATGGTCATTT
TCCTGGTATCAACTCTCACTATTTGGGAGGCTGTCAGTATAAAATGTGGCAAGCCATTAGAGCCTCCTCCGCTGCGCCAG
GCTACTTTGAAGAGTATGCACTGGGCAATGATCTTCATCAAGATGGCGGTTTGCTCCTGAATAACCCTTCAGCATTAGCA
ATGCACGAGTGTAAATGTCTTTGGCCAGACGTCCCCTTGGAGTGCATTGTATCCCTGGGCACTGGGCGGTATGAGAGCGA
CGTGAGAAATGCCGTGACATACACAAGCTTGAAGACCAAGCTGTCGAATGTTATCAACAGCGCTACAGATACGGAAGAAG
TCCATATAATGCTTGACGGTCTGTTACCTCCTGACACCTATTTTAGATTCAATCCTGTAATGTGTGAAAACATACCTCTC
GATGAAAGTCGAAATGAAAAGCTGGATCAGCTGCAGTTGGAAGGGTTGAAGTACATAGAAAGAAATGAAGAAAAGATGAA
AAAACTTGCAAAAATATTAAGTCAAGAAAAAACAACTCTGCAGAAAATTAATGACTGGATAAAACTAAAAACTGACATGT
ATGAAGGCCTTCCATTCTTTTCAAAATTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 9 .64 RPM |
| SRP021940_embryo | 19 .49 RPM |
| SRP021940_cerebellum | 8 .57 RPM |
| SRP021940_testis | 17 .39 RPM |
| SRP021940_placental_villous | 18 .23 RPM |
| SRP021940_articular_cartilage | 8 .44 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_770 | 68.97 | 51.09 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000012878 retrocopies