Parental gene: | PPIB, ENSECAG00000017164 |
| Aliases: | None |
| Description: | peptidyl-prolyl cis-trans isomerase B [Source:RefSeq peptide;Acc:NP_001093231] |
| Organism: | Horse (Equus caballus) |
| Coordinates: | 1:128056021..128061940(+) |
>ENSECAG00000017164
ATGCTGCGTTTCTCAGAGCGGAACATGAAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCTGTCTTCTTCCTGCTGTT
GCCAGGACCCTCCACGGCCGATGAGAAGAAGAAGGGGCCTAAAGTCACTGTCAAGGTGTACTTTGACCTGCGAATTGGAG
ATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCT
ACAGGAGAGAAAGGATTTGGCTACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGACTT
CACCCGGGGAGATGGCACTGGAGGTAAGAGCATCTACGGTGAACGCTTCCCAGACGAGAACTTCAAGCTGAAACACTATG
GGCCCGGCTGGGTGAGCATGGCCAACGCAGGCAAAGACACCAACGGCTCCCAGTTCTTTATCACGACCGTGAAGACAGCC
TGGCTAGATGGCAAGCACGTAGTGTTCGGCAAAGTTCTAGAGGGCATGGAGGTAGTGCGGAAGGTGGAGACCACCAAGAC
AGATGGGCGCGACAAGCCCCTGAAGGATGTGACAATTGCAGACTGTGGCAAGATCGAGGTGGAGAAGCCCTTTGCCATCG
CCAAGGAGTAG
ATGCTGCGTTTCTCAGAGCGGAACATGAAGGTGCTCTTCGCCGCCGCCCTCATCGTGGGCTCTGTCTTCTTCCTGCTGTT
GCCAGGACCCTCCACGGCCGATGAGAAGAAGAAGGGGCCTAAAGTCACTGTCAAGGTGTACTTTGACCTGCGAATTGGAG
ATGAAGATATAGGCCGGGTGGTCATCGGTCTCTTTGGAAAGACTGTTCCAAAAACAGTGGATAATTTTGTGGCCTTAGCT
ACAGGAGAGAAAGGATTTGGCTACAAAGACAGCAAATTCCATCGTGTGATCAAGGACTTCATGATCCAGGGTGGAGACTT
CACCCGGGGAGATGGCACTGGAGGTAAGAGCATCTACGGTGAACGCTTCCCAGACGAGAACTTCAAGCTGAAACACTATG
GGCCCGGCTGGGTGAGCATGGCCAACGCAGGCAAAGACACCAACGGCTCCCAGTTCTTTATCACGACCGTGAAGACAGCC
TGGCTAGATGGCAAGCACGTAGTGTTCGGCAAAGTTCTAGAGGGCATGGAGGTAGTGCGGAAGGTGGAGACCACCAAGAC
AGATGGGCGCGACAAGCCCCTGAAGGATGTGACAATTGCAGACTGTGGCAAGATCGAGGTGGAGAAGCCCTTTGCCATCG
CCAAGGAGTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP021940_synovial_membrane | 442 .64 RPM |
| SRP021940_embryo | 338 .71 RPM |
| SRP021940_cerebellum | 134 .14 RPM |
| SRP021940_testis | 184 .16 RPM |
| SRP021940_placental_villous | 336 .54 RPM |
| SRP021940_articular_cartilage | 516 .45 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000017053 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000012671 | ortholog_one2one | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000018698 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000012012 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ecab_617 | 82.95 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSECAG00000017164 retrocopies