Parental gene:

EAF1, ENSEEUG00000002084

Aliases:None
Description:ELL associated factor 1 [Source:HGNC Symbol;Acc:20907]
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_8820:80376..92262(+)


>ENSEEUG00000002084
ATGAACGGGACGGTGAACCCGCTGCTGGACCGCGAGGAGCACTGCCTGCGGCTGGGGGAGAGCTTCGAGAAGCGGCCGCG
GGCCTCCTTCCACACCATCCGCTATGACTTTAAGCCAGCGTCTATAGATACGTCCTGTGAAGGAGAGCTCCAGGTTGGCA
AAGGAGATGAAGTCACAATTACACTGCCACATATCCCTGGGTCTACACCACCGATGACTGTGTTCAAGGGGAACAAACGG
CCTTATCAGAAAGACTGTGTACTTATTATTAATCATGACACTGGTGAATATGTGCTGGAAAAACTCAGTAGCAGCATTCA
GGTCAAAAAAACCAGAGCTGAGGGGAGCAGTAAAATCCAGGCCCGGATGGAACAGCAGCCCACTCGTCCTCCTCAGCCGA
CACAGCCGCCTCCGCCTCCACCACCTATGCCGTTCAGAGCTCCGACCAAGCCTCCAGCTGGGCCCAAAACGTCTCCCTTG
AAAGATAACCCCTCACCTGAACCGCAGCTGGATGACATCAAAAGAGAGCTGAGGGCTGAAGTTGACATCATTGAGCAGAT
GAGCAGCACTAGTGGGAGCAGCTCCTCAGACTCCGAGAGCTCCTCAGGAAGTGATGACGACAGCTCCAGCAGTGGAGCTG
AGGACAATGGCCCAGCATCTCCTCCACAGCCTTCACACCAGCAGACCTACAACAGCAGACCAGCCGTCGCCAATGGGACC
AGCCGGCCACAAGGAAGCAACCAGCTCATGAACACCCTCCGCAATGACTTGCAGTTGAGTGAGTCTGGAAGTGACAGTGA
TGACTAG

Library Parental gene expression (RPM)
SRP017611_liver 33 .76 RPM
SRP017611_kidney 48 .76 RPM
SRP017611_brain 38 .67 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000006017 ortholog_one2one 1 retrogene
retro_cfam_1658,
Choloepus hoffmanni ENSCHOG00000007449 ortholog_one2one 4 retrogenes
retro_chof_1039, retro_chof_2342, retro_chof_355, retro_chof_883,
Monodelphis domestica ENSMODG00000014543 ortholog_one2many 1 retrogene
retro_mdom_290,
Otolemur garnettii ENSOGAG00000013964 ortholog_one2one 1 retrogene
retro_ogar_2142,
Sarcophilus harrisii ENSSHAG00000006597 ortholog_one2many 2 retrogenes
retro_shar_485, retro_shar_56,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_254 63.75 59.33
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Download FASTA sequences of all ENSEEUG00000002084 retrocopies