Parental gene: | CCNJ, ENSEEUG00000002270 |
| Aliases: | None |
| Description: | cyclin J [Source:HGNC Symbol;Acc:23434] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_8174:44287..137588(+) |
>ENSEEUG00000002270
GAGCTGAAGTTGCCCTCCTACAAAGGCCAGTCCCCTCAACTTAGTCTCCGAAGATATTTTGCTGACTTGATTGCCATCGT
GAGCAATCGCTTCACACTCTGCCCTTCTGCCCGACACCTTGCTGTCTATTTGCTGGACCTGTTTATGGATCGGTATGACA
TCTCTATCCAGCAGCTACACCTAGTTGCACTTTCATGTCTGCTCCTAGCAAGTAAATTTGAAGAGAAAGAAGACAGTGTG
CCTAAGCTGGAGCAGCTCAATAGCCTGGGTTGTATGACTAATATGAATCTAGTCTTAACAAAGCAGAATTTGCTACATAT
GGAACTATTATTGTTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCCCATTTCATCGAGTACTATCTCTCCG
AAGCAGTACATGAAACAGATCTTCATGATGGCTGGCCGATGATTTGCTTGGAAAAAACTAAGCTCTACATGGCCAAGTAC
GCAGATTACTTCCTGGAAGTGTCTTTGCAAGTAGCTGCTGCATGTGTGGCTTCTTCAAGGATTATACTTCGTCTTTCGCC
AACGTGGCCTACAAGACTGCATCGTCTTACTGCTTACTCCTGGGATTTTTTAGTGCAGTGCATTGAACGACTATTAATTG
CTCATGATAATGATGTGAAGGAAGCAAACAAACAAAGAGGACAGGCGGGACCTCAACCAGCACAACTAAATGTCTTCCAG
ACAAGCTCTCAGACCTCACGGCCACCCCCCATCTGTCAGCCTCAGTAT
GAGCTGAAGTTGCCCTCCTACAAAGGCCAGTCCCCTCAACTTAGTCTCCGAAGATATTTTGCTGACTTGATTGCCATCGT
GAGCAATCGCTTCACACTCTGCCCTTCTGCCCGACACCTTGCTGTCTATTTGCTGGACCTGTTTATGGATCGGTATGACA
TCTCTATCCAGCAGCTACACCTAGTTGCACTTTCATGTCTGCTCCTAGCAAGTAAATTTGAAGAGAAAGAAGACAGTGTG
CCTAAGCTGGAGCAGCTCAATAGCCTGGGTTGTATGACTAATATGAATCTAGTCTTAACAAAGCAGAATTTGCTACATAT
GGAACTATTATTGTTAGAAACCTTTCAGTGGAACCTCTGCCTTCCAACAGCTGCCCATTTCATCGAGTACTATCTCTCCG
AAGCAGTACATGAAACAGATCTTCATGATGGCTGGCCGATGATTTGCTTGGAAAAAACTAAGCTCTACATGGCCAAGTAC
GCAGATTACTTCCTGGAAGTGTCTTTGCAAGTAGCTGCTGCATGTGTGGCTTCTTCAAGGATTATACTTCGTCTTTCGCC
AACGTGGCCTACAAGACTGCATCGTCTTACTGCTTACTCCTGGGATTTTTTAGTGCAGTGCATTGAACGACTATTAATTG
CTCATGATAATGATGTGAAGGAAGCAAACAAACAAAGAGGACAGGCGGGACCTCAACCAGCACAACTAAATGTCTTCCAG
ACAAGCTCTCAGACCTCACGGCCACCCCCCATCTGTCAGCCTCAGTAT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 2 .25 RPM |
| SRP017611_kidney | 0 .75 RPM |
| SRP017611_brain | 1 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000016259 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000107443 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000006034 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011114 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000009466 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_535 | 90.13 | 59.38 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_577 | 98.82 | 66.41 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000002270 retrocopies