Parental gene:

ENSEEUG00000013091

Aliases:None
Description:None
Organism:Hedgehog (Erinaceus europaeus)
Coordinates:GeneScaffold_5151:232264..263015(+)


>ENSEEUG00000013091
ATGGCGGTCTTGTTGAGGCTGAGCGTTCTCAGCCGGGCGCAAGGAGGCCGAGCTCTGTTCCTGCGAGCACCAGTGGTCAG
ACCTGCTCTTGTCTCAGCATTTCTCCAGGACCAGCCTATGCCAGGATGGTGTGGGATGCAGCACATTCACCTGTCACCCA
GTCGCTATTCTGATTCCAAGGCTGCCTCTCTCCACTGGACTGGTGAGAGGGTTGTCAGTGTTTTGCTCCTTGGCCTGATT
CCAGCTGCTTATTTGAATCCTTGCTCGGCAATAGACTACTCCCTGGCTGCAACCCTCACTCTTCACANNNNNNNGGGCCT
TGGACAAGTTGTTACCGACTATGTTCATGGGGCTGCAACGCAGAAAGCTGCCAAAGCCGGCATTTTGGCACTCTCAGCTT
TAACCTTTGCTGGGCTTTGTTATTTCAACTACCATGATGTGGGCATCTGCAAAGCTGTTGCCATGCTGTGGAAGCTCTGA

Library Parental gene expression (RPM)
SRP017611_brain 45 .77 RPM
SRP017611_kidney 128 .65 RPM
SRP017611_liver 93 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004066 ortholog_one2one 3 retrogenes
retro_amel_1556, retro_amel_1588, retro_amel_998,
Echinops telfairi ENSETEG00000008424 ortholog_one2one 1 retrogene
retro_etel_252,
Felis catus ENSFCAG00000022580 ortholog_one2one 3 retrogenes
retro_fcat_1371, retro_fcat_175, retro_fcat_492,
Homo sapiens ENSG00000204370 possible_ortholog 8 retrogenes
retro_hsap_124, retro_hsap_1912, retro_hsap_2132, retro_hsap_2182, retro_hsap_2729, retro_hsap_2784, retro_hsap_355, retro_hsap_3791,
Gorilla gorilla ENSGGOG00000026496 ortholog_one2one 1 retrogene
retro_ggor_50,
Loxodonta africana ENSLAFG00000002763 ortholog_one2one 1 retrogene
retro_lafr_432,
Myotis lucifugus ENSMLUG00000012228 ortholog_one2one 3 retrogenes
retro_mluc_2418, retro_mluc_457, retro_mluc_756,
Macaca mulatta ENSMMUG00000015247 possible_ortholog 1 retrogene
retro_mmul_224,
Rattus norvegicus ENSRNOG00000022980 ortholog_one2one 3 retrogenes
retro_rnor_1529, retro_rnor_1686, retro_rnor_744,
Sus scrofa ENSSSCG00000015034 ortholog_one2one 3 retrogenes
retro_sscr_1060, retro_sscr_626, retro_sscr_627,
Tursiops truncatus ENSTTRG00000010520 ortholog_one2one 5 retrogenes
retro_ttru_1554, retro_ttru_238, retro_ttru_616, retro_ttru_633, retro_ttru_885,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_eeur_336 95.05 63.52
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Download FASTA sequences of all ENSEEUG00000013091 retrocopies