Parental gene:

PDE6D, ENSFCAG00000002232

Aliases:None
Description:phosphodiesterase 6D, cGMP-specific, rod, delta [Source:HGNC Symbol;Acc:8788]
Organism:Cat (Felis catus)
Coordinates:C1:213494900..213546610(-)


>ENSFCAG00000002232
ATGTCAGCCAAGGACGAGCGGGCCAGGGAGATCCTGAGGGGCTTCAAACTAAATTGGATGAACCTCCGGGATGCTGAGAC
AGGGAAGATACTATGGCAAGGAACAGAAGACCTGTCAGTCCCCGGTGTGGAGCATGAAGCCCGTGTTCCCAAGAAAATCC
TCAAGTGCAAGGCAGTGTCTCGAGAATTGAACTTCTCTTCAGCAGAGCAAATGGAAAAATTCCGCCTGGAGCAAAAAGTT
TACTTCAAAGGGCAATGCCTAGAAGAATGGTTCTTCGAGTTTGGCTTTGTGATCCCTAACTCCACAAACACCTGGCAGTC
CCTGATAGAGGCAGCGCCCGAGTCCCAGATGATGCCTGCCAGCGTGCTAACTGGGAATGTTATCATAGAGACAAAGTTTT
TTGACGACGATCTTCTTGTAAGCACATCCAGAGTGAGACTTTTCTACGTT

Library Parental gene expression (RPM)
SRP017611_brain 14 .00 RPM
SRP017611_kidney 10 .00 RPM
SRP017611_liver 4 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000012101 ortholog_one2one 1 retrogene
retro_acar_157,
Dasypus novemcinctus ENSDNOG00000000568 ortholog_one2one 1 retrogene
retro_dnov_2585,
Macropus eugenii ENSMEUG00000006427 ortholog_one2one 1 retrogene
retro_meug_1355,
Oryctolagus cuniculus ENSOCUG00000010403 ortholog_one2one 1 retrogene
retro_ocun_182,
Pteropus vampyrus ENSPVAG00000004743 ortholog_one2one 1 retrogene
retro_pvam_544,
Tursiops truncatus ENSTTRG00000009165 ortholog_one2one 1 retrogene
retro_ttru_82,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_317 67.02 62.00
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Download FASTA sequences of all ENSFCAG00000002232 retrocopies