Parental gene:

STX7, ENSFCAG00000002292

Aliases:None
Description:syntaxin 7 [Source:HGNC Symbol;Acc:11442]
Organism:Cat (Felis catus)
Coordinates:B2:121674133..121715287(-)


>ENSFCAG00000002292
ATGTCTTACACTCCGGGTGTTGGTGGTGACCCTGCCCTACTGGCCCAGCGTATCTCTTCCAATATCCAGAAGATCACACA
ATGTTCTGTGGAAATACAGAGGACCCTGAATCAACTTGGAACGCCTCAAGATTCACCTGAACTTAGGCAACAACTGCAAC
AGAAGCAGCAGTATACTAACCAACTTGCCAAAGAGACAGATAAGTACATTAAAGAGTTTGGATCCCTGCCCACCACCCCC
AGCGAACAGCGTCAGAGGAAAATACAAAAGGATCGCTTAGTGGCTCAATTCACGACATCACTGACAAACTTTCAAAAGGT
CCAGAGGGAAGCTGCTGAGAAAGAGAAAGAGTTTGTTGCTCGAGTAAGAGCCAGTTCCAGAGTATCTGGTGGTTTTCCTG
AGGACACCTCAAAGGAAAGGAATCTTGTATCCTGGGAAAGCCAAGCTCAACCTCAGGTGCAGGTGCAGGATGAAGAAATT
ACAGAAGATGACCTCCGCCTTATTCATGAGAGAGAATCTTCTATTAGGCAACTTGAGGCTGATATTATGGATATTAATGA
AATATTTAAAGATTTGGGAATGATGATTCACGAGCAAGGAGATGTAATAGATAGCATAGAAGCCAACGTGGAAAATGCGG
AGGTGCACGTTCAGCAAGCAAACCAGCAGCTGTCAAGAGCAGCAGAATATCAGCGCAAATCCAGAAAAACCCTGTGCATC
ATCATTTTTATCATTGTCATCGGACTTGTAATTCTCGGTCTCATCATATGGAGAGTGAAAGGCTGA

Library Parental gene expression (RPM)
SRP017611_brain 40 .86 RPM
SRP017611_kidney 32 .98 RPM
SRP017611_liver 16 .28 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000010117 ortholog_one2one 3 retrogenes
retro_chof_1503, retro_chof_2631, retro_chof_829,
Dasypus novemcinctus ENSDNOG00000000295 ortholog_one2one 1 retrogene
retro_dnov_600,
Felis catus ENSFCAG00000029657 within_species_paralog 1 retrogene
retro_fcat_1701,
Myotis lucifugus ENSMLUG00000004301 ortholog_one2one 1 retrogene
retro_mluc_494,
Sarcophilus harrisii ENSSHAG00000014440 ortholog_one2one 1 retrogene
retro_shar_430,
Tursiops truncatus ENSTTRG00000009853 ortholog_one2one 1 retrogene
retro_ttru_185,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_fcat_977 88.68 60.54
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Download FASTA sequences of all ENSFCAG00000002292 retrocopies