Parental gene: | PKP4, ENSFCAG00000015402 |
| Aliases: | None |
| Description: | plakophilin 4 [Source:HGNC Symbol;Acc:9026] |
| Organism: | Cat (Felis catus) |
| Coordinates: | C1:148241933..148394175(+) |
>ENSFCAG00000015402
ATGCCCGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGCCAGCCACAGACACGCCAGGAAGCTGCCTCCACTGGCCCAGG
CATGGAACCCGAGACCACAGCCACCACTATTCTAGCTTCCGTGAAGGAGCAGGAGCTTCAGTTTCAACGACTCACCCGAG
AACTGGAAGTGGAAAGGCAGATCGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCCCCGAGTATCGCCAGC
ACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAGATGTGCCAAATACTGGTGTAAACAAACCTAGAGTTTCTGA
CGCTGTCCATCCCAACAACTATCTCATCAGGACAGAGCCAGAACAAGGGACCCTCTACTCACCAGAGCAGACATCTCTCC
ATGAAAGATCATTGGGTAACTCAAGAAGTTCAACACAAATGAATTCTTATTCTGACAGTGGATACCAGGAAGCAGGGAGT
TTCCATAACAGCCAGAATTTGAGTAAAGCAGATAATAGACCACAGCATTCATTTATAGGATCAACTAATAACCATTTGGT
GAGGAATTCAAGAGCTGAAGGACAAACACTGGTTCAGCCATCAGTAGCCAATCGGGCCATGAGAAGAGTTAGTTCAGTTC
CATCTAGAGCACAGTCTCCTTCTTATGTTATCAGCACAGGCGTGTCTCCTTCAAGGGGGTCACTGAGAACTTCTCTGGGT
AGTGGATTTGGCTCTCCATCAGTGACAGACTCCCGACCACTGAACCCCAGTGCATATTCCTCAACCACATTACCTGCTCA
GCGGGCAGCATCTCCATACTCTGCACAGAGACCCGCGTCCCCAACAGCTGTACGTCGGATTGGGTCAGTCACCTCCCGGC
AGACCTCCAATCCCAACGGACCAACCCCTCAGTACCAAACCACCGCCAGAGTAGGGTCCCCGTTGACCCTGATGGATGCA
CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACTGCCGTACCACA
ACATCTGGGACCTTCACTGCAAAGGACTGTTCACGACATGGAACAATTTGGACAGCAGCAGTATGAAATCTACGAAAGGA
TGGTTCCACCTCGGCCAGACAGCCTGACAGGCTTGCGGAGTTCCTACGCTAGTCAGCACAGCCAGCTTGGGCAAGACCTT
CGTTCAGCTGTGTCTCCTGACTTGCACATCACTCCTATATATGAGGGGAGGACCTACTACAGCCCCGTGTACCGCAGCCC
AAACCACGGGACCGTGGAGCTCCAAGGATCACAGACAGCATTGTATCGCACAGGCTCAGGTGTTGGAAATCTGCAAAGGA
CATCCAGCCAACGAAGCACCCTTACATACCAAAGAAATAATTATGCTCTGAACACAACAGCTACCTACGCGGAGCCCTAC
AGGCCAATACAATACCGAGTGCAAGAGTGCAATTATAACAGGCTTCAGCACGCAGCGCCAGCTGATGATGGCACCACGAG
ATCCCCATCGATAGACAGCATTCAGAAAGACCCCAGGGAGTTTGCCTGGCGTGACCCCGAGTTGCCCGAAGTCATTCACA
TGCTGCAGCACCAGTTCCCGTCCGTGCAGGCGAACGCGGCCGCCTACCTGCAGCACCTGTGCTTTGGCGACAACAAAGTG
AAAATGGAGGTGTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTTTGGACCACAGAGTTTTGGAAGTTCAGAAGAA
TGCTTGTGGTGCCCTCCGAAACCTTGTTTTTGGCAAGTCTACAGATGAAAATAAAATAGCAATGAAGAATGTTGGTGGGA
TTCCTGCTTTGTTGCGACTGTTGAGAAAATCTATTGATGCAGAAGTAAGGGAGCTTGTTACAGGAGTTCTTTGGAATTTA
TCTTCATGTGATGCTGTAAAGATGACAATCATTCGAGATGCTCTCTCGACCTTAACAAACACTGTGATCGTTCCACATTC
TGGATGGAATAACTCTTCTTTTGATGATGATCATAAAATTAAATTTCAGACGTCACTCGTTCTGCGTAATACGACAGGTT
GCCTGAGGAACCTCAGCTCTGCAGGGGAGGAAGCGAGGAAGCAAATGCGCTCCTGTGAGGGGCTGGTGGACTCGCTCCTG
TATGTGATCCACACATGTGTGAACACATCCGATTACGACAGCAAGACTGTGGAAAACTGCGTGTGCACCCTGAGGAACCT
GTCCTATCGGCTGGAACTGGAGGTCCCACAGGCCCGGCTACTGGGGCTGAGTGAGCTGGATGACTTACTAGGAAAAGAGT
CTCCCAGCAAGGACTCGGAGCCAAGCTGCTGGGGGAAGAAAAAGAAAAAGAAAAAGAGAACGCCACAGGAGGATCAATGG
GATGGAGTTGGTCCTATCCCAGGACTGTCTAAGTCCCCCAAAGGGGTTGAGATGCTATGGCATCCATCAGTGGTAAAACC
ATATTTGACTCTTCTGGCAGAAAGTTCCAACCCAGCCACCTTGGAAGGCTCTGCCGGATCTCTCCAGAACCTCTCTGCTG
GAAATTGGAAGTTTGCAGCGTATATCCGGGCAGCCGTCCGCAAAGAAAAAGGGCTCCCCATCCTTGTAGAACTTCTGAGA
ATGGATAATGACAGAGTTGTTTCTTCTGTGGCAACTGCCTTGAGGAATATGGCACTAGATGTTCGCAACAAGGAGCTCAT
AGGTAAATATGCCATGCGAGACCTGGTCAACCGGCTTCCCGGCGGCACCGGCCCCAGTGTGCTGTCTGATGAGACCATGG
CGGCCATCTGCTGTGCTCTGCACGAGGTCACCAGCAAAAACATGGAGAATGCCAAAGCCCTGGCCGACTCAGGGGGGATA
GAGAAGCTGGTGAACATAACCAAGGGCAGAGGAGACAGATCATCTCTGAAGGTGGTGAAGGCAGCAGCCCAGGTCTTGAA
TACATTGTGGCAATATCGGGACCTCCGGAGCATTTATAAAAAGGTAACTTAA
ATGCCCGCTCCTGAGCAGGCCTCATTGGTGGAGGAGGGCCAGCCACAGACACGCCAGGAAGCTGCCTCCACTGGCCCAGG
CATGGAACCCGAGACCACAGCCACCACTATTCTAGCTTCCGTGAAGGAGCAGGAGCTTCAGTTTCAACGACTCACCCGAG
AACTGGAAGTGGAAAGGCAGATCGTTGCCAGTCAGCTAGAAAGATGTAGGCTTGGAGCAGAATCCCCGAGTATCGCCAGC
ACCAGCTCAACTGAGAAGTCATTTCCTTGGAGATCAACAGATGTGCCAAATACTGGTGTAAACAAACCTAGAGTTTCTGA
CGCTGTCCATCCCAACAACTATCTCATCAGGACAGAGCCAGAACAAGGGACCCTCTACTCACCAGAGCAGACATCTCTCC
ATGAAAGATCATTGGGTAACTCAAGAAGTTCAACACAAATGAATTCTTATTCTGACAGTGGATACCAGGAAGCAGGGAGT
TTCCATAACAGCCAGAATTTGAGTAAAGCAGATAATAGACCACAGCATTCATTTATAGGATCAACTAATAACCATTTGGT
GAGGAATTCAAGAGCTGAAGGACAAACACTGGTTCAGCCATCAGTAGCCAATCGGGCCATGAGAAGAGTTAGTTCAGTTC
CATCTAGAGCACAGTCTCCTTCTTATGTTATCAGCACAGGCGTGTCTCCTTCAAGGGGGTCACTGAGAACTTCTCTGGGT
AGTGGATTTGGCTCTCCATCAGTGACAGACTCCCGACCACTGAACCCCAGTGCATATTCCTCAACCACATTACCTGCTCA
GCGGGCAGCATCTCCATACTCTGCACAGAGACCCGCGTCCCCAACAGCTGTACGTCGGATTGGGTCAGTCACCTCCCGGC
AGACCTCCAATCCCAACGGACCAACCCCTCAGTACCAAACCACCGCCAGAGTAGGGTCCCCGTTGACCCTGATGGATGCA
CAGACTCGAGTAGCTTCCCCATCCCAAGGCCAGGTGGGGTCGTCGTCCCCCAAACGCTCAGGGATGACTGCCGTACCACA
ACATCTGGGACCTTCACTGCAAAGGACTGTTCACGACATGGAACAATTTGGACAGCAGCAGTATGAAATCTACGAAAGGA
TGGTTCCACCTCGGCCAGACAGCCTGACAGGCTTGCGGAGTTCCTACGCTAGTCAGCACAGCCAGCTTGGGCAAGACCTT
CGTTCAGCTGTGTCTCCTGACTTGCACATCACTCCTATATATGAGGGGAGGACCTACTACAGCCCCGTGTACCGCAGCCC
AAACCACGGGACCGTGGAGCTCCAAGGATCACAGACAGCATTGTATCGCACAGGCTCAGGTGTTGGAAATCTGCAAAGGA
CATCCAGCCAACGAAGCACCCTTACATACCAAAGAAATAATTATGCTCTGAACACAACAGCTACCTACGCGGAGCCCTAC
AGGCCAATACAATACCGAGTGCAAGAGTGCAATTATAACAGGCTTCAGCACGCAGCGCCAGCTGATGATGGCACCACGAG
ATCCCCATCGATAGACAGCATTCAGAAAGACCCCAGGGAGTTTGCCTGGCGTGACCCCGAGTTGCCCGAAGTCATTCACA
TGCTGCAGCACCAGTTCCCGTCCGTGCAGGCGAACGCGGCCGCCTACCTGCAGCACCTGTGCTTTGGCGACAACAAAGTG
AAAATGGAGGTGTGTAGGTTAGGGGGAATCAAGCATCTGGTTGACCTTTTGGACCACAGAGTTTTGGAAGTTCAGAAGAA
TGCTTGTGGTGCCCTCCGAAACCTTGTTTTTGGCAAGTCTACAGATGAAAATAAAATAGCAATGAAGAATGTTGGTGGGA
TTCCTGCTTTGTTGCGACTGTTGAGAAAATCTATTGATGCAGAAGTAAGGGAGCTTGTTACAGGAGTTCTTTGGAATTTA
TCTTCATGTGATGCTGTAAAGATGACAATCATTCGAGATGCTCTCTCGACCTTAACAAACACTGTGATCGTTCCACATTC
TGGATGGAATAACTCTTCTTTTGATGATGATCATAAAATTAAATTTCAGACGTCACTCGTTCTGCGTAATACGACAGGTT
GCCTGAGGAACCTCAGCTCTGCAGGGGAGGAAGCGAGGAAGCAAATGCGCTCCTGTGAGGGGCTGGTGGACTCGCTCCTG
TATGTGATCCACACATGTGTGAACACATCCGATTACGACAGCAAGACTGTGGAAAACTGCGTGTGCACCCTGAGGAACCT
GTCCTATCGGCTGGAACTGGAGGTCCCACAGGCCCGGCTACTGGGGCTGAGTGAGCTGGATGACTTACTAGGAAAAGAGT
CTCCCAGCAAGGACTCGGAGCCAAGCTGCTGGGGGAAGAAAAAGAAAAAGAAAAAGAGAACGCCACAGGAGGATCAATGG
GATGGAGTTGGTCCTATCCCAGGACTGTCTAAGTCCCCCAAAGGGGTTGAGATGCTATGGCATCCATCAGTGGTAAAACC
ATATTTGACTCTTCTGGCAGAAAGTTCCAACCCAGCCACCTTGGAAGGCTCTGCCGGATCTCTCCAGAACCTCTCTGCTG
GAAATTGGAAGTTTGCAGCGTATATCCGGGCAGCCGTCCGCAAAGAAAAAGGGCTCCCCATCCTTGTAGAACTTCTGAGA
ATGGATAATGACAGAGTTGTTTCTTCTGTGGCAACTGCCTTGAGGAATATGGCACTAGATGTTCGCAACAAGGAGCTCAT
AGGTAAATATGCCATGCGAGACCTGGTCAACCGGCTTCCCGGCGGCACCGGCCCCAGTGTGCTGTCTGATGAGACCATGG
CGGCCATCTGCTGTGCTCTGCACGAGGTCACCAGCAAAAACATGGAGAATGCCAAAGCCCTGGCCGACTCAGGGGGGATA
GAGAAGCTGGTGAACATAACCAAGGGCAGAGGAGACAGATCATCTCTGAAGGTGGTGAAGGCAGCAGCCCAGGTCTTGAA
TACATTGTGGCAATATCGGGACCTCCGGAGCATTTATAAAAAGGTAACTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 15 .77 RPM |
| SRP017611_kidney | 70 .39 RPM |
| SRP017611_brain | 147 .14 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000015236 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_fcat_1721 | 68.95 | 50.15 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSFCAG00000015402 retrocopies