Parental gene:

RNF14, ENSG00000013561

Aliases:RNF14, ARA54, HFB30, TRIAD2
Description:ring finger protein 14 [Source:HGNC Symbol;Acc:10058]
Organism:Human (Homo sapiens)
Coordinates:5:141337892..141369856(+)


>ENSG00000013561
ATGTCGTCAGAAGATCGAGAAGCTCAGGAGGATGAATTGCTGGCCCTGGCAAGTATTTACGATGGAGATGAATTTAGAAA
AGCAGAGTCTGTCCAAGGTGGAGAAACCAGGATCTATTTGGATTTGCCACAGAATTTCAAGATATTTGTGAGCGGCAATT
CAAATGAGTGTCTCCAGAATAGTGGCTTTGAATACACCATTTGCTTTCTGCCTCCACTTGTGCTGAACTTTGAACTGCCA
CCAGATTATCCATCCTCTTCCCCACCTTCATTCACACTTAGTGGCAAATGGCTGTCACCAACTCAGCTATCTGCTCTATG
CAAGCACTTAGACAACCTATGGGAAGAACACCGTGGCAGCGTGGTCCTGTTTGCCTGGATGCAATTTCTTAAGGAAGAGA
CCCTAGCATACTTGAATATTGTCTCTCCTTTTGAGCTCAAGATTGGTTCTCAGAAAAAAGTGCAGAGAAGGACAGCTCAA
GCTTCTCCCAACACAGAGCTAGATTTTGGAGGAGCTGCTGGATCTGATGTAGACCAAGAGGAAATTGTGGATGAGAGAGC
AGTGCAGGATGTGGAATCACTGTCAAATCTGATCCAGGAAATCTTGGACTTTGATCAAGCTCAGCAGATAAAATGCTTTA
ATAGTAAATTGTTCCTGTGCAGTATCTGTTTCTGTGAGAAGCTGGGTAGTGAATGCATGTACTTCTTGGAGTGCAGGCAT
GTGTACTGCAAAGCCTGTCTGAAGGACTACTTTGAAATCCAGATCAGAGATGGCCAGGTTCAATGCCTCAACTGCCCAGA
ACCAAAGTGCCCTTCGGTGGCCACTCCTGGTCAGGTCAAAGAGTTAGTGGAAGCAGAGTTATTTGCCCGTTATGACCGCC
TTCTCCTCCAGTCCTCCTTGGACCTGATGGCAGATGTGGTGTACTGCCCCCGGCCGTGCTGCCAGCTGCCTGTGATGCAG
GAACCTGGCTGCACCATGGGTATCTGCTCCAGCTGCAATTTTGCCTTCTGTACTTTGTGCAGGTTGACCTACCATGGGGT
CTCCCCATGTAAGGTGACTGCAGAGAAATTAATGGACTTACGAAATGAATACCTGCAAGCGGATGAGGCTAATAAAAGAC
TTTTGGATCAAAGGTATGGTAAGAGAGTGATTCAGAAGGCACTGGAAGAGATGGAAAGTAAGGAGTGGCTAGAGAAGAAC
TCAAAGAGCTGCCCATGTTGTGGAACTCCCATAGAGAAATTAGACGGATGTAACAAGATGACATGTACTGGCTGTATGCA
ATATTTCTGTTGGATTTGCATGGGTTCTCTCTCTAGAGCAAACCCTTACAAACATTTCAATGACCCTGGTTCACCATGTT
TTAACCGGCTGTTTTATGCTGTGGATGTTGACGACGATATTTGGGAAGATGAGGTAGAAGACTAG

Library Parental gene expression (RPM)
bodymap2_adipose 34 .87 RPM
bodymap2_adrenal 33 .53 RPM
bodymap2_brain 63 .55 RPM
bodymap2_breast 89 .16 RPM
bodymap2_colon 43 .82 RPM
bodymap2_heart 94 .50 RPM
bodymap2_kidney 91 .01 RPM
bodymap2_liver 41 .30 RPM
bodymap2_lung 28 .73 RPM
bodymap2_lymph_node 34 .83 RPM
bodymap2_ovary 49 .52 RPM
bodymap2_prostate 58 .91 RPM
bodymap2_skeletal_muscle 23 .26 RPM
bodymap2_testis 85 .91 RPM
bodymap2_thyroid 72 .58 RPM
bodymap2_white_blood_cells 40 .48 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000007803 possible_ortholog 1 retrogene
retro_dnov_332,
Dasypus novemcinctus ENSDNOG00000024423 possible_ortholog 1 retrogene
retro_dnov_1704,
Gorilla gorilla ENSGGOG00000008542 ortholog_one2one 1 retrogene
retro_ggor_2612,
Macaca mulatta ENSMMUG00000009768 ortholog_one2one 2 retrogenes
retro_mmul_1647, retro_mmul_934,
Pongo abelii ENSPPYG00000015894 ortholog_one2one 2 retrogenes
retro_pabe_3095, retro_pabe_3115,
Pan troglodytes ENSPTRG00000017356 ortholog_one2one 2 retrogenes
retro_ptro_2571, retro_ptro_2643,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3790 85.60 77.00
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2. retro_hsap_3881 72.80 100.00
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Download FASTA sequences of all ENSG00000013561 retrocopies