Parental gene:

ATXN7L3, ENSG00000087152

Aliases:None
Description:ataxin 7-like 3 [Source:HGNC Symbol;Acc:25416]
Organism:Human (Homo sapiens)
Coordinates:17:42269172..42277481(-)


>ENSG00000087152
ATGAAAATGGAGGAAATGTCTTTGTCTGGCCTGGATAACAGCAAACTAGAGGCCATCGCTCAGGAGATATACGCGGACCT
GGTCGAGGATTCTTGTTTGGGATTCTGCTTTGAGGTACACCGGGCTGTCAAGTGTGGCTACTTCTTCTTGGACGACACGG
ACCCTGATAGCATGAAGGATTTTGAGATCGTGGACCAGCCGGGCTTGGACATCTTTGGACAGGTTTTCAACCAGTGGAAG
AGCAAGGAGTGTGTTTGCCCCAATTGCAGTCGCAGCATTGCCGCCTCCCGCTTTGCTCCCCATCTGGAGAAGTGCCTGGG
AATGGGTCGGAACAGCAGCCGAATCGCCAACCGCCGGATTGCCAATAGCAACAATATGAATAAGTCTGAGAGTGACCAAG
AAGATAATGATGACATCAATGACAACGACTGGTCCTATGGCTCGGAGAAGAAAGCCAAGAAGAGAAAGTCAGACAAGCTA
TGGTATCTCCCATTCCAGAACCCCAATTCCCCTCGAAGATCCAAGTCATTAAAACACAAAAATGGGGAACTTAGCAATTC
GGATCCTTTTAAGTATAACAATTCAACTGGGATCAGCTATGAGACCCTGGGGCCGGAGGAGCTTCGCAGCCTGCTAACCA
CGCAATGTGGGGTGATTTCTGAACACACCAAGAAGATGTGCACAAGGTCCCTGCGCTGCCCACAGCACACAGATGAGCAG
AGGCGAACCGTACGGATTTATTTTCTCGGGCCCTCGGCTGTCCTTCCAGAGGTCGAGAGCTCCCTGGATAATGACAGCTT
TGACATGACTGACAGCCAGGCCCTGATCAGCCGGCTTCAGTGGGACGGCTCCTCTGACCTCTCACCCTCTGATTCAGGCT
CCTCCAAGACGAGTGAAAATCAGGGATGGGGTCTAGGTACCAACAGCTCTGAGTCACGGAAAACCAAGAAAAAGAAATCC
CATCTGAGCCTGGTAGGGACTGCCTCCGGCCTAGGTTCCAACAAGAAGAAGAAGCCAAAGCCACCGGCACCCCCGACGCC
CAGCATCTATGATGACATCAACTGA

Library Parental gene expression (RPM)
bodymap2_liver 16 .96 RPM
bodymap2_lung 38 .40 RPM
bodymap2_breast 22 .43 RPM
bodymap2_adipose 34 .93 RPM
bodymap2_adrenal 39 .55 RPM
bodymap2_skeletal_muscle 18 .41 RPM
bodymap2_thyroid 32 .97 RPM
bodymap2_prostate 40 .91 RPM
bodymap2_colon 30 .63 RPM
bodymap2_testis 47 .98 RPM
bodymap2_brain 73 .44 RPM
bodymap2_heart 18 .68 RPM
bodymap2_white_blood_cells 79 .14 RPM
bodymap2_lymph_node 62 .97 RPM
bodymap2_ovary 55 .00 RPM
bodymap2_kidney 38 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Dasypus novemcinctus ENSDNOG00000003379 ortholog_one2one 13 retrogenes
retro_dnov_1026, retro_dnov_1144, retro_dnov_1211, retro_dnov_1590, retro_dnov_1902, retro_dnov_2325, retro_dnov_2448, retro_dnov_2497, retro_dnov_2600, retro_dnov_516, retro_dnov_86, retro_dnov_867, retro_dnov_961,
Gorilla gorilla ENSGGOG00000010959 ortholog_one2one 1 retrogene
retro_ggor_3023,
Myotis lucifugus ENSMLUG00000006416 possible_ortholog 1 retrogene
retro_mluc_41,
Macaca mulatta ENSMMUG00000029935 ortholog_one2many 1 retrogene
retro_mmul_820,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_4847 79.56 78.67
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Download FASTA sequences of all ENSG00000087152 retrocopies