Parental gene:

YKT6, ENSG00000106636

Aliases:None
Description:YKT6 v-SNARE homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:16959]
Organism:Human (Homo sapiens)
Coordinates:7:44240566..44253893(+)


>ENSG00000106636
ATGAAGCTGTACAGCCTCAGCGTCCTCTACAAAGGCGAGGCCAAGGTGGTGCTGCTCAAAGCCGCATACGATGTGTCTTC
CTTCAGCTTTTTCCAGAGATCCAGCGTTCAGGAATTCATGACCTTCACGAGTCAACTGATTGTGGAGCGCTCATCGAAAG
GCACTAGAGCTTCTGTCAAAGAACAAGACTATCTGTGCCACGTCTACGTCCGGAATGATAGTCTTGCAGGTGTGGTCATT
GCTGACAATGAATACCCATCCCGGGTGGCCTTTACCTTGCTGGAGAAGGTACTAGATGAATTCTCCAAGCAAGTCGACAG
GATAGACTGGCCAGTAGGATCCCCTGCTACAATCCATTACCCAGCCCTGGATGGTCACCTCAGTAGATACCAGAACCCAC
GAGAAGCTGATCCCATGACTAAAGTGCAGGCCGAACTAGATGAGACCAAAATCATTCTGCACAACACCATGGAGTCTCTG
TTAGAGCGAGGTGAGAAGCTAGATGACTTGGTGTCCAAATCCGAGGTGCTGGGAACACAGTCTAAAGCCTTCTATAAAAC
TGCCCGGAAACAAAACTCATGCTGTGCCATCATGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 56 .31 RPM
bodymap2_adrenal 74 .96 RPM
bodymap2_brain 55 .90 RPM
bodymap2_breast 65 .78 RPM
bodymap2_colon 43 .25 RPM
bodymap2_heart 34 .80 RPM
bodymap2_kidney 63 .18 RPM
bodymap2_liver 21 .06 RPM
bodymap2_lung 32 .17 RPM
bodymap2_lymph_node 53 .54 RPM
bodymap2_ovary 60 .53 RPM
bodymap2_prostate 41 .65 RPM
bodymap2_skeletal_muscle 26 .81 RPM
bodymap2_testis 65 .10 RPM
bodymap2_thyroid 75 .49 RPM
bodymap2_white_blood_cells 61 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017618 ortholog_one2one 1 retrogene
retro_amel_967,
Bos taurus ENSBTAG00000000274 ortholog_one2one 1 retrogene
retro_btau_601,
Canis familiaris ENSCAFG00000002903 ortholog_one2many 1 retrogene
retro_cfam_740,
Choloepus hoffmanni ENSCHOG00000011207 ortholog_one2one 1 retrogene
retro_chof_657,
Callithrix jacchus ENSCJAG00000008053 ortholog_one2one 2 retrogenes
retro_cjac_2394, retro_cjac_2492,
Dasypus novemcinctus ENSDNOG00000015173 ortholog_one2one 1 retrogene
retro_dnov_1364,
Dipodomys ordii ENSDORG00000016393 ortholog_one2one 1 retrogene
retro_dord_621,
Erinaceus europaeus ENSEEUG00000001247 ortholog_one2one 1 retrogene
retro_eeur_267,
Felis catus ENSFCAG00000014362 ortholog_one2one 1 retrogene
retro_fcat_1327,
Macropus eugenii ENSMEUG00000014769 ortholog_one2one 1 retrogene
retro_meug_2068,
Mustela putorius furo ENSMPUG00000018200 ortholog_one2many 2 retrogenes
retro_mputfur_141, retro_mputfur_165,
Mus musculus ENSMUSG00000002741 ortholog_one2one 1 retrogene
retro_mmus_825,
Oryctolagus cuniculus ENSOCUG00000002981 ortholog_one2many 1 retrogene
retro_ocun_15,
Sus scrofa ENSSSCG00000016750 ortholog_one2one 1 retrogene
retro_sscr_1063,
Tursiops truncatus ENSTTRG00000006052 ortholog_one2one 2 retrogenes
retro_ttru_1320, retro_ttru_417,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3687 82.72 95.45
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Download FASTA sequences of all ENSG00000106636 retrocopies