Parental gene: | SSX2IP, ENSG00000117155 |
| Aliases: | SSX2IP, ADIP |
| Description: | synovial sarcoma, X breakpoint 2 interacting protein [Source:HGNC Symbol;Acc:16509] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 1:85109389..85156486(-) |
>ENSG00000117155
ATGGGAGATTGGATGACTGTTACAGATCCAGGTCTGTCTTCAGAAAGCAAAACTATCTCTCAATATACCTCAGAAACAAA
GATGTCTCCATCAAGTTTATACTCACAGCAAGTGCTATGTTCTTCAATACCTTTATCGAAAAATGTGCACAGTTTTTTCA
GTGCCTTCTGCACAGAAGATAATATTGAACAGAGTATCTCATATCTTGATCAGGAATTGACTACTTTTGGTTTTCCTTCA
TTATATGAAGAATCCAAAGGTAAAGAGACAAAGAGAGAGTTAAATATAGTAGCTGTACTAAATTGTATGAATGAGCTGCT
TGTGCTTCAGCGGAAGAACCTTCTAGCTCAGGAAAATGTGGAGACACAGAATTTGAAGCTGGGAAGTGATATGGACCATC
TACAGAGCTGCTACTCAAAACTTAAGGAACAACTGGAAACCTCCAGGAGGGAAATGATTGGGCTTCAGGAAAGAGACAGA
CAGTTACAATGTAAGAACAGGAATTTGCATCAGCTACTAAAGAATGAGAAAGATGAGGTGCAAAAATTACAAAATATCAT
TGCAAGTCGAGCTACTCAGTATAATCATGATATGAAGAGAAAAGAGCGTGAATATAATAAACTGAAGGAACGTCTACATC
AACTTGTTATGAACAAGAAAGATAAGAAAATAGCTATGGACATTTTGAATTATGTCGGGAGAGCTGATGGAAAAAGAGGC
TCCTGGAGGACTGGTAAAACTGAAGCCAGGAATGAAGATGAAATGTATAAAATTCTCTTGAATGATTATGAATATCGTCA
GAAACAAATCCTAATGGAAAATGCAGAACTTAAGAAGGTTCTTCAACAAATGAAAAAGGAAATGATTTCTCTTCTTTCTC
CCCAAAAGAAGAAACCTAGAGAAAGAGTAGATGATAGTACAGGAACTGTTATTTCCGATGTTGAAGAAGATGCCGGGGAA
CTAAGCAGAGAGAGTATGTGGGACCTTTCCTGTGAAACTGTGAGAGAGCAGCTTACAAACAGCATCAGAAAACAGTGGAG
AATTTTGAAAAGTCATGTAGAAAAGCTTGATAACCAAGTTTCAAAGGTACACCTGGAAGGTTTTAATGATGAAGATGTAA
TCTCACGACAAGACCATGAACAAGAAACTGAAAAACTCGAGTTAGAAATTCAGCAGTGTAAAGAAATGATTAAAACTCAG
CAACAGCTTTTACAGCAGCAGCTCGCTACTGCATATGATGATGATACCACTTCACTATTACGAGACTGTTATTTGTTGGA
AGAAAAGGAACGTCTCAAAGAAGAATGGTCCCTTTTTAAAGAGCAGAAAAAGAATTTTGAGAGGGAGAGACGAAGCTTTA
CAGAAGCCGCTATTCGCCTGGGATTGGAGAGAAAGGCATTTGAAGAAGAAAGAGCCAGTTGGTTAAAGCAGCAGTTTCTA
AATATGACTACCTTTGACCACCAGAACTCAGAAAATGTGAAACTTTTCAGTGCCTTCTCAGGAAGTTCTGATTGGGACAA
TCTTATAGTGCACTCGAGGCAGCCGCAAAAGAAGCCTCACAGTGTGTCTAATGGGTCTCCAGTTTGCATGTCTAAACTTA
CTAAATCTCTTCCTGCTTCACCTTCCACTTCAGACTTTTGCCAGACACGTTCCTGCATATCTGAACATAGTTCAATCAAT
GTACTGAATATAACTGCTGAAGAAATTAAACCAAATCAGGTTGGAGGAGAATGTACAAATCAAAAATGGAGTGTGGCATC
AAGACCTGGATCACAGGAAGGTTGCTATAGTGGATGCTCCTTGAGCTACACAAATTCTCATGTAGAAAAAGATGACTTAC
CTTAG
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 3 .94 RPM |
| bodymap2_adrenal | 10 .32 RPM |
| bodymap2_brain | 138 .98 RPM |
| bodymap2_breast | 6 .83 RPM |
| bodymap2_colon | 40 .78 RPM |
| bodymap2_heart | 16 .04 RPM |
| bodymap2_kidney | 48 .52 RPM |
| bodymap2_liver | 14 .11 RPM |
| bodymap2_lung | 8 .95 RPM |
| bodymap2_lymph_node | 7 .13 RPM |
| bodymap2_ovary | 16 .83 RPM |
| bodymap2_prostate | 20 .99 RPM |
| bodymap2_skeletal_muscle | 9 .29 RPM |
| bodymap2_testis | 205 .08 RPM |
| bodymap2_thyroid | 22 .15 RPM |
| bodymap2_white_blood_cells | 22 .48 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Pongo abelii | ENSPPYG00000001201 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000000906 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004276 | ortholog_one2one | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008402 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_2822 | 75.16 | 50.16 | Please wait, loading  |
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Download FASTA sequences of all ENSG00000117155 retrocopies