Parental gene: | PNKD, ENSG00000127838 |
| Aliases: | PNKD, BRP17, DYT8, FPD1, KIPP1184, MR-1, MR1, PDC, PKND1, TAHCCP2 |
| Description: | paroxysmal nonkinesigenic dyskinesia [Source:HGNC Symbol;Acc:9153] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 2:219135114..219211516(+) |
>ENSG00000127838
ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCTCGCAGG
AGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCAAGGAGGAACCTG
AACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCTGTGGGACTGGCCTGGTAC
AGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCTACCCTAAAGG
CCACTCGAAAACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACC
TCATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAG
GAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCG
GCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACGGCATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGG
TCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTACTGGATGGG
GAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTGTGGGCGGACCTTTGAGGGCAA
TGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGGCTAGGGGATGACACCCTTCTGTGGCCTGGTCATGAGTATG
CAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGG
CAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCCTACAACCCGTTCCTGAGAACCCACTG
CCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGGGCCCCACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAG
AGCTCCGCCGGCTGAAGGATATGCACAAGAGCAAGTGA
ATGGCGGCGGTGGTAGCTGCTACGGCGCTGAAGGGCCGGGGGGCGAGAAATGCCCGCGTCCTCCGGGGGATTCTCGCAGG
AGCCACAGCTAACAAGGCTTCTCATAACAGGACCCGGGCCCTGCAAAGCCACAGCTCCCCAGAGGGCAAGGAGGAACCTG
AACCCCTATCCCCGGAGCTGGAATACATTCCCAGAAAGAGGGGCAAGAACCCCATGAAAGCTGTGGGACTGGCCTGGTAC
AGCCTGTACACCCGCACCTGGCTCGGGTACCTCTTCTACCGACAGCAGCTGCGCAGGGCTCGGAATCGCTACCCTAAAGG
CCACTCGAAAACCCAGCCCCGCCTCTTCAATGGAGTGAAGGTGCTTCCCATCCCTGTCCTCTCGGACAACTACAGCTACC
TCATCATCGACACCCAGGCCCAGCTGGCTGTGGCTGTGGACCCTTCAGACCCTCGGGCTGTGCAGGCTTCCATTGAAAAG
GAAGGGGTCACCTTGGTCGCCATTCTGTGTACTCACAAGCACTGGGACCACAGTGGAGGGAACCGTGACCTCAGCCGGCG
GCACCGGGACTGTCGGGTGTACGGGAGCCCTCAGGACGGCATCCCCTACCTCACCCATCCCCTGTGTCATCAAGATGTGG
TCAGCGTGGGACGGCTTCAGATCCGGGCCCTGGCTACACCTGGCCACACACAAGGCCATCTGGTCTACCTACTGGATGGG
GAGCCCTACAAGGGTCCCTCCTGCCTCTTCTCAGGGGACCTGCTCTTCCTCTCTGGCTGTGGGCGGACCTTTGAGGGCAA
TGCAGAGACCATGCTGAGCTCACTGGACACTGTGCTGGGGCTAGGGGATGACACCCTTCTGTGGCCTGGTCATGAGTATG
CAGAGGAGAACCTGGGCTTTGCAGGTGTGGTGGAGCCCGAGAACCTGGCCCGGGAGAGGAAGATGCAGTGGGTGCAGCGG
CAGCGGCTGGAGCGCAAGGGCACGTGCCCATCTACCCTGGGAGAGGAGCGCTCCTACAACCCGTTCCTGAGAACCCACTG
CCTGGCGCTACAGGAGGCTCTGGGGCCGGGGCCGGGCCCCACTGGGGATGATGACTACTCCCGGGCCCAGCTCCTGGAAG
AGCTCCGCCGGCTGAAGGATATGCACAAGAGCAAGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 147 .21 RPM |
| bodymap2_lung | 26 .02 RPM |
| bodymap2_breast | 24 .20 RPM |
| bodymap2_adipose | 19 .42 RPM |
| bodymap2_adrenal | 36 .68 RPM |
| bodymap2_skeletal_muscle | 5 .66 RPM |
| bodymap2_thyroid | 46 .89 RPM |
| bodymap2_prostate | 44 .89 RPM |
| bodymap2_colon | 25 .08 RPM |
| bodymap2_testis | 36 .20 RPM |
| bodymap2_brain | 52 .34 RPM |
| bodymap2_heart | 19 .11 RPM |
| bodymap2_white_blood_cells | 30 .65 RPM |
| bodymap2_lymph_node | 31 .25 RPM |
| bodymap2_ovary | 25 .85 RPM |
| bodymap2_kidney | 53 .79 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000003936 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_4902 | 87.79 | 92.25 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000127838 retrocopies