Parental gene:

TUBG1, ENSG00000131462

Aliases:TUBG1, CDCBM4, GCP-1, TUBG, TUBGCP1
Description:tubulin, gamma 1 [Source:HGNC Symbol;Acc:12417]
Organism:Human (Homo sapiens)
Coordinates:17:40761693..40767252(+)


>ENSG00000131462
ATGCCGAGGGAAATCATCACCCTACAGTTGGGCCAGTGCGGCAATCAGATTGGGTTCGAGTTCTGGAAACAGCTGTGCGC
CGAGCATGGTATCAGCCCCGAGGGCATCGTGGAGGAGTTCGCCACCGAGGGCACTGACCGCAAGGACGTCTTTTTCTACC
AGGCAGACGATGAGCACTACATCCCCCGGGCCGTGCTGCTGGACTTGGAACCCCGGGTGATCCACTCCATCCTCAACTCC
CCCTATGCCAAGCTCTACAACCCAGAGAACATCTACCTGTCGGAACATGGAGGAGGAGCTGGCAACAACTGGGCCAGCGG
ATTCTCCCAGGGAGAAAAGATCCATGAGGACATTTTTGACATCATAGACCGGGAGGCAGATGGTAGTGACAGTCTAGAGG
GCTTTGTGCTGTGTCACTCCATTGCTGGGGGGACAGGCTCTGGACTGGGTTCCTACCTCTTAGAACGGCTGAATGACAGG
TATCCTAAGAAGCTGGTGCAGACATACTCAGTGTTTCCCAACCAGGACGAGATGAGCGATGTGGTGGTCCAGCCTTACAA
TTCACTCCTCACACTCAAGAGGCTGACGCAGAATGCAGACTGTGTGGTGGTGCTGGACAACACAGCCCTGAACCGGATTG
CCACAGACCGCCTGCACATCCAGAACCCATCCTTCTCCCAGATCAACCAGCTGGTGTCTACCATCATGTCAGCCAGCACC
ACCACCCTGCGCTACCCTGGCTACATGAACAATGACCTCATCGGCCTCATCGCCTCGCTCATTCCCACCCCACGGCTCCA
CTTCCTCATGACCGGCTACACCCCTCTCACTACGGACCAGTCAGTGGCCAGCGTGAGGAAGACCACGGTCCTGGATGTCA
TGAGGCGGCTGCTGCAGCCCAAGAACGTGATGGTGTCCACAGGCCGAGACCGCCAGACCAACCACTGCTACATCGCCATC
CTCAACATCATCCAGGGAGAGGTGGACCCCACCCAGGTCCACAAGAGCTTGCAGAGGATCCGGGAACGCAAGTTGGCCAA
CTTCATCCCGTGGGGCCCCGCCAGCATCCAGGTGGCCCTGTCGAGGAAGTCTCCCTACCTGCCCTCGGCCCACCGGGTCA
GCGGGCTCATGATGGCCAACCACACCAGCATCTCCTCGCTCTTCGAGAGAACCTGTCGCCAGTATGACAAGCTGCGTAAG
CGGGAGGCCTTCCTGGAGCAGTTCCGCAAGGAGGACATGTTCAAGGACAACTTTGATGAGATGGACACATCCAGGGAGAT
TGTGCAGCAGCTCATCGATGAGTACCATGCGGCCACACGGCCAGACTACATCTCCTGGGGCACCCAGGAGCAGTGA

Library Parental gene expression (RPM)
bodymap2_adipose 20 .37 RPM
bodymap2_adrenal 20 .04 RPM
bodymap2_brain 14 .95 RPM
bodymap2_breast 19 .32 RPM
bodymap2_colon 10 .44 RPM
bodymap2_heart 17 .98 RPM
bodymap2_kidney 25 .07 RPM
bodymap2_liver 12 .06 RPM
bodymap2_lung 15 .68 RPM
bodymap2_lymph_node 16 .15 RPM
bodymap2_ovary 20 .65 RPM
bodymap2_prostate 11 .07 RPM
bodymap2_skeletal_muscle 62 .02 RPM
bodymap2_testis 142 .11 RPM
bodymap2_thyroid 15 .40 RPM
bodymap2_white_blood_cells 4 .37 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004907 ortholog_one2one 1 retrogene
retro_cjac_4142,
Echinops telfairi ENSETEG00000008542 possible_ortholog 1 retrogene
retro_etel_496,
Gorilla gorilla ENSGGOG00000010899 possible_ortholog 1 retrogene
retro_ggor_2515,
Macaca mulatta ENSMMUG00000016797 ortholog_one2one 1 retrogene
retro_mmul_1692,
Nomascus leucogenys ENSNLEG00000011686 ortholog_one2many 1 retrogene
retro_nleu_71,
Pongo abelii ENSPPYG00000008384 possible_ortholog 1 retrogene
retro_pabe_3132,
Pan troglodytes ENSPTRG00000009211 ortholog_one2one 1 retrogene
retro_ptro_2520,
Rattus norvegicus ENSRNOG00000020213 ortholog_one2one 2 retrogenes
retro_rnor_2070, retro_rnor_2072,
Tupaia belangeri ENSTBEG00000015835 ortholog_one2one 3 retrogenes
retro_tbel_188, retro_tbel_3516, retro_tbel_955,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3725 87.32 94.01
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Download FASTA sequences of all ENSG00000131462 retrocopies