Parental gene:

ABCE1, ENSG00000164163

Aliases:ABCE1, ABC38, OABP, RLI, RNASEL1, RNASELI, RNS4I
Description:ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69]
Organism:Human (Homo sapiens)
Coordinates:4:146019083..146050331(+)


>ENSG00000164163
ATGGCAGACAAGTTAACGAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGACAGGAATGCAAAAA
GAGTTGTCCTGTAGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCCGAAACTC
TTTGTATTGGTTGTGGTATCTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATCTACCAAGCAACTTGGAA
AAAGAAACCACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGT
ACGATGATCCTCCTGACTGGCAGGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACAAAGATTCTA
GAAGATGACCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTCCTAAGGCTGCAAAGGGGACAGTGGGATCTAT
TTTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATTTTCATGTTT
GATGAGCCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGATAG
ATATATCATTGTGGTGGAACATGATCTAAGTGTATTAGACTATCTCTCCGACTTCATCTGCTGTTTATATGGTGTACCAA
GCGCCTATGGAGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAA
AACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTAT
GTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAATTTGAGCTAGCAATTGTAGCTGGAGAGTTTACAGATTCTGAAA
TTATGGTGATGCTGGGGGAAAATGGAACGGGTAAAACGACATTTATCAGAATGCTTGCTGGAAGACTTAAACCTGATGAA
GGAGGAGAAGTACCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATTAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ACTACATGAAAAGATAAGAGATGCTTATACTCACCCACAATTTGTGACCGATGTAATGAAGCCTCTGCAAATTGAAAACA
TCATTGATCAAGAGGTGCAGACATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTTTGCTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGACTGATGGCAGCTCGAGTTGTCAAACGTTT
CATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCGGATCGCGTCATCG
TTTTTGATGGTGTTCCATCTAAGAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCTGGCATGAATAAATTTTTGTCT
CAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGGCCACGAATAAACAAACTTAATTCAATTAAGGATGTAGA
ACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG

Library Parental gene expression (RPM)
bodymap2_liver 53 .48 RPM
bodymap2_lung 66 .56 RPM
bodymap2_breast 61 .40 RPM
bodymap2_adipose 54 .55 RPM
bodymap2_adrenal 85 .07 RPM
bodymap2_skeletal_muscle 63 .68 RPM
bodymap2_thyroid 87 .92 RPM
bodymap2_prostate 61 .21 RPM
bodymap2_colon 64 .52 RPM
bodymap2_testis 106 .01 RPM
bodymap2_brain 81 .43 RPM
bodymap2_heart 44 .69 RPM
bodymap2_white_blood_cells 73 .47 RPM
bodymap2_lymph_node 43 .91 RPM
bodymap2_ovary 96 .48 RPM
bodymap2_kidney 65 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004534 ortholog_one2one 1 retrogene
retro_chof_1280,
Cavia porcellus ENSCPOG00000007367 ortholog_one2one 1 retrogene
retro_cpor_289,
Macaca mulatta ENSMMUG00000004433 ortholog_one2one 1 retrogene
retro_mmul_1628,
Mus musculus ENSMUSG00000058355 ortholog_one2one 1 retrogene
retro_mmus_1503,
Nomascus leucogenys ENSNLEG00000005460 ortholog_one2one 1 retrogene
retro_nleu_2125,
Oryctolagus cuniculus ENSOCUG00000001821 ortholog_one2one 2 retrogenes
retro_ocun_1925, retro_ocun_668,
Procavia capensis ENSPCAG00000006183 ortholog_one2one 1 retrogene
retro_pcap_90,
Pongo abelii ENSPPYG00000015097 ortholog_one2one 1 retrogene
retro_pabe_3067,
Pan troglodytes ENSPTRG00000016481 ortholog_one2one 1 retrogene
retro_ptro_2603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3826 90.02 99.67
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Download FASTA sequences of all ENSG00000164163 retrocopies