Parental gene: | SNRPD1, ENSG00000167088 |
| Aliases: | SNRPD1, HsT2456, SMD1, SNRPD, Sm-D1 |
| Description: | small nuclear ribonucleoprotein D1 polypeptide 16kDa [Source:HGNC Symbol;Acc:11158] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 18:19192227..19210344(+) |
>ENSG00000167088
ATGAAGCTCGTGAGATTTTTGATGAAATTGAGTCATGAAACTGTAACCATTGAATTGAAGAACGGAACACAGGTCCATGG
AACAATCACAGGTGTGGATGTCAGCATGAATACACATCTTAAAGCTGTGAAAATGACCCTGAAGAACAGAGAACCTGTAC
AGCTGGAAACGCTGAGTATTCGAGGAAATAACATTCGGTATTTTATTCTACCAGACAGTTTACCTCTGGATACACTACTT
GTGGATGTTGAACCTAAGGTGAAATCTAAGAAAAGGGAAGCTGTTGCAGGAAGAGGCAGAGGAAGAGGAAGAGGAAGAGG
ACGTGGCCGTGGCAGAGGAAGAGGGGGTCCTAGGCGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_adipose | 24 .07 RPM |
| bodymap2_adrenal | 48 .76 RPM |
| bodymap2_brain | 34 .76 RPM |
| bodymap2_breast | 24 .32 RPM |
| bodymap2_colon | 31 .05 RPM |
| bodymap2_heart | 11 .96 RPM |
| bodymap2_kidney | 30 .26 RPM |
| bodymap2_liver | 19 .94 RPM |
| bodymap2_lung | 17 .65 RPM |
| bodymap2_lymph_node | 27 .06 RPM |
| bodymap2_ovary | 47 .79 RPM |
| bodymap2_prostate | 22 .27 RPM |
| bodymap2_skeletal_muscle | 14 .35 RPM |
| bodymap2_testis | 45 .04 RPM |
| bodymap2_thyroid | 32 .62 RPM |
| bodymap2_white_blood_cells | 26 .68 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000006364 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000008292 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000005567 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000002477 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000023761 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000011791 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_372 | 78.99 | 100.00 | Please wait, loading  |
Please wait, loading |
Please wait, loading |
| 2. | retro_hsap_1147 | 71.93 | 90.76 | Please wait, loading |
Please wait, loading |
Please wait, loading |
Download FASTA sequences of all ENSG00000167088 retrocopies