Parental gene:

SF3A3, ENSG00000183431

Aliases:SF3A3, PRP9, PRPF9, SAP61, SF3a60
Description:splicing factor 3a, subunit 3, 60kDa [Source:HGNC Symbol;Acc:10767]
Organism:Human (Homo sapiens)
Coordinates:1:38422646..38456593(-)


>ENSG00000183431
ATGGAGACAATACTGGAGCAGCAGCGGCGCTATCATGAGGAGAAGGAACGGCTCATGGACGTCATGGCTAAAGAGATGCT
CACCAAGAAGTCCACGCTCCGGGACCAGATCAATTCTGATCACCGCACTCGGGCCATGCAAGATAGGTATATGGAGGTCA
GTGGGAACCTGAGGGATTTGTATGATGATAAGGATGGATTACGAAAGGAGGAGCTCAATGCCATTTCAGGACCCAATGAG
TTTGCTGAATTCTATAATAGACTCAAGCAAATAAAGGAATTCCACCGGAAGCACCCAAATGAGATCTGTGTGCCAATGTC
AGTGGAATTTGAGGAACTCCTGAAGGCTCGAGAGAATCCAAGTGAAGAGGCACAAAACTTGGTGGAGTTCACAGATGAAG
AGGGATATGGTCGTTATCTCGATCTCCATGACTGTTACCTCAAGTACATTAACCTGAAGGCATCTGAGAAGCTGGATTAT
ATCACATACCTGTCCATCTTTGACCAATTATTTGACATTCCTAAAGAAAGGAAGAATGCAGAGTATAAGAGATACCTAGA
GATGCTGCTTGAGTACCTTCAGGATTACACAGATAGAGTGAAGCCTCTCCAAGATCAGAATGAACTTTTTGGGAAGATTC
AGGCTGAGTTTGAGAAGAAATGGGAGAATGGGACCTTTCCTGGATGGCCGAAAGAGACAAGCAGTGCCCTGACCCATGCT
GGAGCCCATCTTGACCTCTCTGCATTCTCCTCCTGGGAGGAGTTGGCTTCTCTGGGTTTGGACAGATTGAAATCTGCTCT
CTTAGCTTTAGGCTTGAAATGTGGCGGGACCCTAGAAGAGCGAGCCCAGAGACTATTCAGTACCAAAGGAAAGTCCCTGG
AGTCACTTGATACCTCTTTGTTTGCCAAAAATCCCAAGTCAAAGGGCACCAAGCGAGACACTGAAAGGAACAAAGACATT
GCTTTTCTAGAAGCCCAGATCTATGAATATGTAGAGATTCTCGGGGAACAGCGACATCTCACTCATGAAAATGTACAGCG
CAAGCAAGCCAGGACAGGAGAAGAGCGAGAAGAAGAGGAAGAAGAGCAGATCAGTGAGAGTGAGAGTGAAGATGAAGAGA
ACGAGATCATTTACAACCCCAAAAACCTGCCACTTGGCTGGGATGGCAAACCTATTCCCTACTGGCTGTATAAGCTTCAT
GGCCTAAATATCAACTACAACTGTGAGATTTGTGGAAACTACACCTACCGAGGGCCCAAAGCCTTCCAGCGACACTTTGC
TGAATGGCGTCATGCTCATGGCATGAGGTGTTTGGGCATCCCAAACACTGCTCACTTTGCTAATGTGACACAGATTGAAG
ATGCTGTCTCCTTGTGGGCCAAACTGAAATTGCAGAAGGCTTCAGAACGATGGCAGCCTGACACTGAGGAAGAATATGAA
GACTCAAGTGGGAATGTTGTGAATAAGAAGACATACGAGGATCTGAAAAGACAAGGACTGCTCTAG

Library Parental gene expression (RPM)
bodymap2_adipose 62 .22 RPM
bodymap2_adrenal 79 .52 RPM
bodymap2_brain 48 .33 RPM
bodymap2_breast 54 .77 RPM
bodymap2_colon 68 .16 RPM
bodymap2_heart 22 .30 RPM
bodymap2_kidney 60 .33 RPM
bodymap2_liver 26 .28 RPM
bodymap2_lung 32 .95 RPM
bodymap2_lymph_node 48 .64 RPM
bodymap2_ovary 116 .28 RPM
bodymap2_prostate 66 .27 RPM
bodymap2_skeletal_muscle 26 .92 RPM
bodymap2_testis 99 .17 RPM
bodymap2_thyroid 80 .58 RPM
bodymap2_white_blood_cells 87 .73 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000001262 ortholog_one2one 1 retrogene
retro_amel_485,
Canis familiaris ENSCAFG00000003222 ortholog_one2many 1 retrogene
retro_cfam_176,
Callithrix jacchus ENSCJAG00000002176 ortholog_one2one 1 retrogene
retro_cjac_4109,
Cavia porcellus ENSCPOG00000008660 ortholog_one2one 1 retrogene
retro_cpor_658,
Macropus eugenii ENSMEUG00000002534 ortholog_one2one 3 retrogenes
retro_meug_1135, retro_meug_1346, retro_meug_642,
Macaca mulatta ENSMMUG00000023199 ortholog_one2one 1 retrogene
retro_mmul_631,
Monodelphis domestica ENSMODG00000017729 ortholog_one2many 1 retrogene
retro_mdom_269,
Nomascus leucogenys ENSNLEG00000011720 ortholog_one2one 1 retrogene
retro_nleu_2775,
Pan troglodytes ENSPTRG00000000559 ortholog_one2one 2 retrogenes
retro_ptro_1411, retro_ptro_649,
Sorex araneus ENSSARG00000014204 ortholog_one2one 1 retrogene
retro_sara_407,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_937 91.06 86.83
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_hsap_2441 90.86 66.87
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSG00000183431 retrocopies