Parental gene: | PPIL2, ENSLAFG00000016750 |
| Aliases: | None |
| Description: | None |
| Organism: | Elephant (Loxodonta africana) |
| Coordinates: | scaffold_70:778916..809237(+) |
>ENSLAFG00000016750
ATGGGGAAGCGACAGCACCAGAAGGACAAGATGTACATTACCTGTGCTGAGTATACTCACTTCTATGGTGGCAAGAAGCC
AGATATCCCCAAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCAGCCGTTCGTCTACCCGGTGT
GCACCCCTGAAGGCATCGTCTTTGACTTGCTGAGCATCCTCCCTTGGCTTAAGAAGTACGGGACCAACCCTAGCAACGGA
GAGAAACTAGATGGACGGTCCTTGATTAAGCTAAATTTTGCGAAGAACAATGAAGGTAAATATCACTGCCCTGTGCTGTT
CACCGTGTTCACCAACAACACCCACATCGTGGCCATCAAAACGACGGGCAATGTCTATGCCTACGAGGCAGTGGAGCAGC
TGAATATCAAGGCCAAGAACTTCCGGGACCTGCTGACCGATGAGCCCTTCTCCCGGCAGGACATCATCACCCTTCAGGAT
CCCACCAATTTGGACAAATTTAACGTCTCCAACTTCTTTCATGTAAAGAACAATATGAAAATGATAGACCCAGATGAAGA
AAAAGCCAAACAGGACCCGTCTTACTACCTGAAAAACACGAACGCGGAGACCCGGGAGACCCTGCAGGAGCTCTACAAGG
AGTTCAAAGGGGACGAGGTTCTGGCGGCCACCATGAAGGCCCCTGAGAAGAAGAAAGTGGACAAGCTGAACGCCGCCCAC
TACTCCACTGGGAAGGTCAGCGCTTCCTTCACCTCCACCGCCATGGCTCCAGAGACGACGCATGAAGCAGCCGCCATCGA
TGAAGACGTCCTGCGCTACCAGTTTGTAAAGAAGAAGGGCTACGTGCGGCTCCACACCAACAGGGGTGACCTCAACCTGG
AGCTGCACTGCGACCTGACGCCCAAGACCTGTGAGAACTTCATCAGGCTCTGCAAGAAGCACTACTACGACGGCACCATC
TTCCACAGGTCCATCAGGAACTTCGTGATCCAAGGGGGTGACCCCACTGGCACTGGCACGGGTGGAGAGTCGTTCTGGGG
AAAGCCTTTCAAAGACGAGTTCCGGCCCAACCTCTCCCACACGGGCCGGGGTATCCTCAGCATGGCCAACTCGGGGCCCA
ACAGCAACAAGTCTCAGTTCTTCATCACTTTCCGCTCCTGTGCCTACCTGGACAAGAAGCACACCATCTTTGGGCGGGTT
GTTGGAGGCTTCGACACACTGACAGCCATGGAGAACGTGGAGAGTGACCCCAAAACTGACCGCCCTAAGGAGGAGATCCG
CATCGAGTCCACCACAGTGTTTGTGGACCCCTATGAGGAGGCTGATGCTCAGATCGCTGAGGAGCGCAAGAAGACGCAGC
TGAAAGAGGAGGCCCTGGAGACCACTGTGAAGACAAGCCAGCCCCAGCTGGGGAGCCCTGGACCCCAAGCGTACCGCCAG
GGGGTTGGCAAGTACATCAGCCCAGAGGCCACGAAGCGGGCAGCAGAGGAAGAGCCATCCACTAGCACCGCCGCCCCCAC
AGCTAAGAAGAGGCCCAGCAGAGGCTTTGGGGACTTCAGCTCCTGGTAG
ATGGGGAAGCGACAGCACCAGAAGGACAAGATGTACATTACCTGTGCTGAGTATACTCACTTCTATGGTGGCAAGAAGCC
AGATATCCCCAAAACAAATTTTCGTCGTTTACCTTTTGACCACTGCAGTCTCTCTCTGCAGCCGTTCGTCTACCCGGTGT
GCACCCCTGAAGGCATCGTCTTTGACTTGCTGAGCATCCTCCCTTGGCTTAAGAAGTACGGGACCAACCCTAGCAACGGA
GAGAAACTAGATGGACGGTCCTTGATTAAGCTAAATTTTGCGAAGAACAATGAAGGTAAATATCACTGCCCTGTGCTGTT
CACCGTGTTCACCAACAACACCCACATCGTGGCCATCAAAACGACGGGCAATGTCTATGCCTACGAGGCAGTGGAGCAGC
TGAATATCAAGGCCAAGAACTTCCGGGACCTGCTGACCGATGAGCCCTTCTCCCGGCAGGACATCATCACCCTTCAGGAT
CCCACCAATTTGGACAAATTTAACGTCTCCAACTTCTTTCATGTAAAGAACAATATGAAAATGATAGACCCAGATGAAGA
AAAAGCCAAACAGGACCCGTCTTACTACCTGAAAAACACGAACGCGGAGACCCGGGAGACCCTGCAGGAGCTCTACAAGG
AGTTCAAAGGGGACGAGGTTCTGGCGGCCACCATGAAGGCCCCTGAGAAGAAGAAAGTGGACAAGCTGAACGCCGCCCAC
TACTCCACTGGGAAGGTCAGCGCTTCCTTCACCTCCACCGCCATGGCTCCAGAGACGACGCATGAAGCAGCCGCCATCGA
TGAAGACGTCCTGCGCTACCAGTTTGTAAAGAAGAAGGGCTACGTGCGGCTCCACACCAACAGGGGTGACCTCAACCTGG
AGCTGCACTGCGACCTGACGCCCAAGACCTGTGAGAACTTCATCAGGCTCTGCAAGAAGCACTACTACGACGGCACCATC
TTCCACAGGTCCATCAGGAACTTCGTGATCCAAGGGGGTGACCCCACTGGCACTGGCACGGGTGGAGAGTCGTTCTGGGG
AAAGCCTTTCAAAGACGAGTTCCGGCCCAACCTCTCCCACACGGGCCGGGGTATCCTCAGCATGGCCAACTCGGGGCCCA
ACAGCAACAAGTCTCAGTTCTTCATCACTTTCCGCTCCTGTGCCTACCTGGACAAGAAGCACACCATCTTTGGGCGGGTT
GTTGGAGGCTTCGACACACTGACAGCCATGGAGAACGTGGAGAGTGACCCCAAAACTGACCGCCCTAAGGAGGAGATCCG
CATCGAGTCCACCACAGTGTTTGTGGACCCCTATGAGGAGGCTGATGCTCAGATCGCTGAGGAGCGCAAGAAGACGCAGC
TGAAAGAGGAGGCCCTGGAGACCACTGTGAAGACAAGCCAGCCCCAGCTGGGGAGCCCTGGACCCCAAGCGTACCGCCAG
GGGGTTGGCAAGTACATCAGCCCAGAGGCCACGAAGCGGGCAGCAGAGGAAGAGCCATCCACTAGCACCGCCGCCCCCAC
AGCTAAGAAGAGGCCCAGCAGAGGCTTTGGGGACTTCAGCTCCTGGTAG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Loxodonta africana | ENSLAFG00000018698 | within_species_paralog | 1 retrogene | |
| Loxodonta africana | ENSLAFG00000028161 | within_species_paralog | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000026900 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_lafr_469 | 83.94 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSLAFG00000016750 retrocopies