Parental gene:

VAX1, ENSMMUG00000000543

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:9:132889406..132891486(+)


>ENSMMUG00000000543
ATGCGCCTCTCCTCCTCCCCACCTCGTGGCCAGCAGCAGCCCTCCAGCTTTGGCTCTGTGGACTGGCTCTCCCAGAGCAG
CTGCTCAGGGTTGACCCCCTCGCCCAGGCCTGCCGACGTCTCCCCGGGGAGCCTCCCTGGCCCGGGCCAGATATCCGGCG
CCCGGGAGCCCCCTCAGGCCATCAGCATCAAGGAGGCCGAAAGGGCATCCTGGGAACCGGCTTCGGAAGCCTCTATGCCA
GGGTTGAGTAAGGAGCCAAATACCTTGCGGGGCCCCCGTGTCCGCACAGCCTTCACCACGGAGCAGGTCCGCACCTTGGA
GGGCGTCTTCCAGCACCACCAGTACCTGAGCCCTCTTGAGCGGAAGAGGCTGGCCAGGGAGATGCAGCTCTCAGAGGTCC
AGATAAAAACCTGGTTTCAGAATCGCCGGATGAAACACAAACGGCAAATGCAAGAAGTCCCGCCGAACAGCCCCTTCCTG
GGGTCTCTCCACGTGCCCCCAGCTTTCCACTCACCGTCTTCTGGCCTTGCCAATGGCCTGCAGCTGCTGTGCCCTTGGGC
ACCCCTGCCTGGGCCCCAGGCTCTGATGCTGCCCCCGGGCTCCTTCTGGGGTCTCTGCCAAGTGGAACAGGAGGCCCTGG
CCTCTACGGGGGCTTCCTGCTGCAGGCAACCTCTGGCGCACCACCCCCCAACCACAGGAAGTGGCCTGCCTGCACCGGGA
CCAGCCCTGTCCACGGGGCCCTGGGGCCTGTGCGCTCTGCCGGAGACAGGGGATGCCTTTTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_brain_prefrontal_cortex 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .04 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000151650 ortholog_one2one 4 retrogenes
retro_hsap_1027, retro_hsap_2612, retro_hsap_3973, retro_hsap_4038,
Gorilla gorilla ENSGGOG00000003340 ortholog_one2one 3 retrogenes
retro_ggor_1830, retro_ggor_2668, retro_ggor_2708,
Nomascus leucogenys ENSNLEG00000002047 ortholog_one2one 5 retrogenes
retro_nleu_2033, retro_nleu_2054, retro_nleu_635, retro_nleu_664, retro_nleu_905,
Pan troglodytes ENSPTRG00000003087 ortholog_one2one 4 retrogenes
retro_ptro_1761, retro_ptro_2698, retro_ptro_2736, retro_ptro_702,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1477 75.38 100.00
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2. retro_mmul_2294 66.67 100.00
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Download FASTA sequences of all ENSMMUG00000000543 retrocopies