Parental gene:

MMU.1544, ENSMMUG00000003363

Aliases:None
Description:Krueppel-like factor 3 [Source:RefSeq peptide;Acc:NP_001248209]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:5:33641836..33678934(+)


>ENSMMUG00000003363
ATGCTCATGTTTGACCCAGTTCCTGTCAAGCAAGAGGCCATGGACCCTGTCTCAGTGTCATACCCATCTAATTACATGGA
ATCCATGAAGCCCAACAAATATGGGGTCATCTACTCCACACCATTGCCCGAGAAGTTCTTTCAGACCCCAGAAGGCCTGT
CACACGGAATACAGATGGAGCCAGTGGACCTCACGGTGAACAAGCGGAGTTCACCCCCTTCGGCTGGGAATTCGCCCTCC
TCTCTGAAGTTCCCGTCCTCACACCGGAGAGCCTCGCCTGGGTTGAGCATGCCATCTTCCAGCCCACCGATAAAAAAATA
CTCACCCCCTTCTCCAGGCGTGCAGCCCTTCGGCGTGCCACTGTCCATGCCACCAGTGATGGCAGCTGCTCTCTCACGGC
ACGGAATACGGAGCCCGGGGATCCTGCCCGTCATCCAGCCGGTGGTGGTGCAGCCCGTCCCCTTTATGTACACGAGTCAC
CTCCAGCAGCCTCTCATGGTCTCCTTGTCGGAGGAAATGGAAAATTCCAGTAGTAGCATGCAAGTACCTGTAATTGAATC
ATATGAGAAGCCTATATCACAGAAAAAAATTAAAATAGAACCTGGGATTGAACCACAGAGGACAGATTATTATCCTGAAG
AAATGTCACCCCCCTTAATGAACTCAGTGTCCCCCCCGCAAGCATTGTTGCAAGAGAATCACCCTTCGGTCATCGTGCAG
CCTGGGAAGAGACCTTTACCTGTGGAATCCCCGGATACTCAAAGGAAGCGGAGGATACACAGATGTGATTATGATGGATG
CAACAAAGTGTACACTAAAAGCTCCCACTTGAAAGCACACAGAAGAACACACACAGGAGAAAAACCCTACAAATGTACAT
GGGAAGGATGCACATGGAAGTTTGCTCGGTCTGATGAACTAACAAGACATTTCCGAAAACATACTGGAATCAAACCTTTC
CAGTGCCCGGACTGCGACCGCAGCTTCTCCCGTTCTGACCATCTTGCCCTCCATAGGAAACGCCACATGCTAGTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 21 .07 RPM
SRP007412_brain_prefrontal_cortex 17 .37 RPM
SRP007412_cerebellum 17 .82 RPM
SRP007412_heart 16 .61 RPM
SRP007412_kidney 24 .88 RPM
SRP007412_liver 28 .38 RPM
SRP007412_testis 7 .54 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000017488 ortholog_one2one 1 retrogene
retro_btau_271,
Choloepus hoffmanni ENSCHOG00000004256 ortholog_one2one 1 retrogene
retro_chof_181,
Macaca mulatta ENSMMUG00000014678 within_species_paralog 1 retrogene
retro_mmul_1561,
Nomascus leucogenys ENSNLEG00000017046 ortholog_one2one 1 retrogene
retro_nleu_2431,
Otolemur garnettii ENSOGAG00000006524 ortholog_one2one 1 retrogene
retro_ogar_1686,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2118 78.65 51.01
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Download FASTA sequences of all ENSMMUG00000003363 retrocopies