Parental gene: | MMU.18776, ENSMMUG00000012164 |
| Aliases: | None |
| Description: | tubulin beta-2C chain [Source:RefSeq peptide;Acc:NP_001181720] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 15:999181..1001571(-) |
>ENSMMUG00000012164
ATGAGGGAAATCGTGCACCTGCAGGCCGGGCAGTGCGGCAACCAAATCGGCGCCAAGTTCTGGGAGGTGATCAGCGATGA
GCACGGCATCGACCCCACGGGCACCTACCACGGGGACAGCGACCTGCAGCTGGAGCGCATCAACGTGTACTACAACGAGG
CCACCGGCGGCAAGTACGTGCCCCGCGCCGTGCTCGTGGATCTGGAGCCCGGCACCATGGACTCCGTGCGCTCGGGGCCC
TTCGGGCAGATCTTCCGGCCGGACAACTTCGTCTTCGGTCAGAGTGGTGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGCGCGGAGCTGGTGGACTCGGTGCTGGATGTTGTGAGGAAGGAGGCTGAGAGCTGTGACTGCCTGCAGGGATTCC
AGCTGACCCACTCCCTGGGTGGGGGGACGGGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCCGGGAGGAGTACCCA
GACAGGATCATGAACACGTTCAGTGTGGTGCCTTCGCCCAAGGTGTCAGACACAGTGGTGGAGCCCTACAACGCCACCCT
CTCAGTCCACCAGCTCGTAGAAAACACAGACGAGACCTACTGCATTGATAACGAAGCTCTCTACGACATTTGCTTCAGAA
CCCTAAAGTTGACCACGCCCACCTATGGTGACCTGAACCACCTGGTGTCTGCTACCATGAGTGGGGTCACCACCTGCCTG
CGCTTCCCGGGCCAGCTCAATGCTGACCTGCGGAAGCTGGCTGTGAACATGGTCCCATTCCCCCGCCTGCACTTCTTCAT
GCCCGGCTTTGCCCCACTGACCAGCCGGGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TTGATGCCAAGAACATGATGGCTGCTTGTGACCCCCGCCATGGCCGCTACCTGACGGTTGCTGCCGTGTTCAGGGGCCGC
ATGTCCATGAAGGAGGTGGACGAGCAAATGCTTAATGTCCAAAACAAAAACAGCAGCTATTTTGTTGAGTGGATCCCCAA
CAATGTGAAAACAGCTGTCTGTGACATCCCGCCCCGGGGGCTAAAAATGTCCGCCACCTTCATCGGCAACAGCACGGCCA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTGGTGTCTGAGTACCAGCAGTACCAGGA
CGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGAGGTGGCCTAG
ATGAGGGAAATCGTGCACCTGCAGGCCGGGCAGTGCGGCAACCAAATCGGCGCCAAGTTCTGGGAGGTGATCAGCGATGA
GCACGGCATCGACCCCACGGGCACCTACCACGGGGACAGCGACCTGCAGCTGGAGCGCATCAACGTGTACTACAACGAGG
CCACCGGCGGCAAGTACGTGCCCCGCGCCGTGCTCGTGGATCTGGAGCCCGGCACCATGGACTCCGTGCGCTCGGGGCCC
TTCGGGCAGATCTTCCGGCCGGACAACTTCGTCTTCGGTCAGAGTGGTGCTGGGAACAACTGGGCCAAGGGGCACTACAC
AGAAGGCGCGGAGCTGGTGGACTCGGTGCTGGATGTTGTGAGGAAGGAGGCTGAGAGCTGTGACTGCCTGCAGGGATTCC
AGCTGACCCACTCCCTGGGTGGGGGGACGGGGTCTGGGATGGGTACCCTCCTCATCAGCAAGATCCGGGAGGAGTACCCA
GACAGGATCATGAACACGTTCAGTGTGGTGCCTTCGCCCAAGGTGTCAGACACAGTGGTGGAGCCCTACAACGCCACCCT
CTCAGTCCACCAGCTCGTAGAAAACACAGACGAGACCTACTGCATTGATAACGAAGCTCTCTACGACATTTGCTTCAGAA
CCCTAAAGTTGACCACGCCCACCTATGGTGACCTGAACCACCTGGTGTCTGCTACCATGAGTGGGGTCACCACCTGCCTG
CGCTTCCCGGGCCAGCTCAATGCTGACCTGCGGAAGCTGGCTGTGAACATGGTCCCATTCCCCCGCCTGCACTTCTTCAT
GCCCGGCTTTGCCCCACTGACCAGCCGGGGCAGCCAGCAGTACCGGGCCCTGACCGTGCCCGAGCTCACCCAGCAGATGT
TTGATGCCAAGAACATGATGGCTGCTTGTGACCCCCGCCATGGCCGCTACCTGACGGTTGCTGCCGTGTTCAGGGGCCGC
ATGTCCATGAAGGAGGTGGACGAGCAAATGCTTAATGTCCAAAACAAAAACAGCAGCTATTTTGTTGAGTGGATCCCCAA
CAATGTGAAAACAGCTGTCTGTGACATCCCGCCCCGGGGGCTAAAAATGTCCGCCACCTTCATCGGCAACAGCACGGCCA
TCCAGGAGCTGTTCAAGCGCATCTCCGAGCAGTTCACGGCCATGTTCCGGCGCAAGGCCTTCCTGCACTGGTACACGGGC
GAGGGCATGGACGAGATGGAGTTCACCGAGGCTGAGAGCAACATGAACGACCTGGTGTCTGAGTACCAGCAGTACCAGGA
CGCCACAGCCGAGGAGGAGGGCGAGTTCGAGGAGGAGGCTGAGGAGGAGGTGGCCTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 51 .96 RPM |
| SRP007412_brain | 9 .75 RPM |
| SRP007412_cerebellum | 9 .94 RPM |
| SRP007412_heart | 12 .72 RPM |
| SRP007412_kidney | 21 .36 RPM |
| SRP007412_liver | 124 .33 RPM |
| SRP007412_testis | 224 .20 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000011966 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000010939 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000023684 | within_species_paralog | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000029059 | within_species_paralog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000017213 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000036752 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000005927 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000023373 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000010170 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_1849 | 75.75 | 59.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_2533 | 84.53 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000012164 retrocopies