Parental gene:

THOC4, ENSMMUG00000012884

Aliases:THOC4, ALYREF
Description:Aly/REF export factor [Source:RefSeq peptide;Acc:NP_001247942]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:16:77316953..77320712(-)


>ENSMMUG00000012884
ATGCCCGATTCCGCGCCCGCCATGGCCGACAAAATGGACATGTCTCTGGACGACATCATTAAACTGAACCGGAGCCAACG
AGGCGGCCGCGGCGGGGGCCGGGGCCGCGGCCGGGCCGGCTCCCAGGGCGGTCGCGGCGGTGGGGCGCAGGCCGCCGCGC
GAGTGAGTCGAGGCGGCGGGCCCATCCGGAACCGGCCGGCCATCGCCCGCGGCGCGGCCGGCGGAGGCGGCAGGAACCGA
CCGGCGCCCTACAGCAGGCCAAAACAACTTCCCGACAAGTGGCAGCACGATCTTTTCGACAGTGGCTTCGGGGGTGGTGC
CGGCGTGGAGACGGGTGGGAAACTGCTGGTGTCCAATCTGGATTTTGGAGTTTCAGACGCCGATATTCAGGAACTCTTTG
CTGAATTTGGAACGCTGAAGAAGGCGGCTGTGCACTATGATCGCTCTGGCCGCAGCTTAGGAACAGCAGACGTGCACTTT
GAGCGGAAGGCAGATGCCCTGAAGGCCATGAAGCAGTACAACGGCGTCCCTCTGGATGGCCGCCCCATGAACATTCAGCT
TGTCACATCACAGATTGATACACAGCGGAGACCTGCACAGAGCGTAAACAGAGGTGGCATGACTAGAAACCGTGGCGCTG
GAGGTTTTGGTGGCGGTGGAGGCACTCGGAGGGGCACCCGTGGAGGCGCCCGTGGAAGAGGCAGAGGTGCCGGCAGAAAT
TCAAAGCAGCAGCTTTCGGCAGAGGAGCTGGATGCTCAGCTGGACGCCTATAATGCGAGAATGGACACCAGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 10 .20 RPM
SRP007412_brain_prefrontal_cortex 18 .48 RPM
SRP007412_cerebellum 9 .17 RPM
SRP007412_heart 13 .84 RPM
SRP007412_kidney 10 .45 RPM
SRP007412_liver 9 .70 RPM
SRP007412_testis 85 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000005877 ortholog_one2one 1 retrogene
retro_cfam_1395,
Gorilla gorilla ENSGGOG00000013935 ortholog_one2one 1 retrogene
retro_ggor_2523,
Mus musculus ENSMUSG00000025134 ortholog_one2many 1 retrogene
retro_mmus_286,
Sarcophilus harrisii ENSSHAG00000010459 ortholog_one2many 1 retrogene
retro_shar_332,
Tupaia belangeri ENSTBEG00000005834 ortholog_one2many 7 retrogenes
retro_tbel_237, retro_tbel_2432, retro_tbel_251, retro_tbel_2690, retro_tbel_2918, retro_tbel_3933, retro_tbel_3934,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1679 78.57 63.26
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Download FASTA sequences of all ENSMMUG00000012884 retrocopies