Parental gene:

SCAMP1, ENSMMUG00000016398

Aliases:None
Description:secretory carrier membrane protein 1 [Source:HGNC Symbol;Acc:10563]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:74645677..74730486(+)


>ENSMMUG00000016398
GATCCATCAGTTACACAAGTGACAAGAAATGTTCCACCAGGACTTGACGAATATAATCCATTCTCGGATTCTAGAACACC
TCCCAAAGTGCTGAGATTACAGGTACCAAATGAACCAAATATCCCTGTAATATTTTCTGTAACTATGATCTTCAGTAAAA
TTCCTGTACTTTGGAAGTGTGAACATGCATTGGCCCAAGCTGAGCTTCTTAAGCGCCAGGAAGAACTAGAAAGAAAAGCC
GCAGAATTAGATCGTCGGGAACGAGAAATGCAAAACCTCAGTCAACATGGTAGAAAAAATAATTGGCCACCTCTTCCTAG
CAATTTTCCTGTTGGACCTTGTTTCTATCAGGATTTTTCTGTAGACATTCCTGTAGAATTCCAAAAGACAGTAAAGCTTA
TGTACTACTTGTGGATGTTCCATGCAGTAACACTGTTTCTAAATATCTTCGGATGCTTGGCTTGGTTTTGTGTTGATTCT
GCAAGAGCGGTTGATTTTGGATTGAGTATCCTGTGGTTCTTGCTTTTTACTCCTTGTTCATTCGTCTGTTGGTACAGACC
ACTTTATGGAGCTTTCAGGAGTGACAGTTCATTTAGATTCTTTGTATTCTTCTTCGTCTATATTTGTCAGTTTGCTGTAC
ATGTACTCCAAGCTGCAGGATTTCATAATTGGGGCAATTGTGGTTGGATTTCATCCCTTACTGGTCTCAACCAAAATATT
CCTGTTGGAATCATGATGATAATCATAGCAGCACTTTTCACAGCGTCAGCAGTCATCTCACTAGTTATGTTCAAAAAAGT
ACATGGACTATATCGCACAACAGGTGCGAGTTTTGAGAAGGCCCAACAAGAGTTTGCAACAGGTGTGATGTCCAACAAAA
CTGTCCAGACCGCAGCTGCAAATGCAGCTTCAACTGCAGCATCTAGTGCAGCTCAGAATGCTTTCAAGGGTAACCAAATT
TAA

Library Parental gene expression (RPM)
SRP007412_brain 46 .28 RPM
SRP007412_brain_prefrontal_cortex 31 .26 RPM
SRP007412_cerebellum 29 .70 RPM
SRP007412_heart 4 .65 RPM
SRP007412_kidney 9 .04 RPM
SRP007412_liver 1 .82 RPM
SRP007412_testis 16 .21 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000032395 ortholog_one2one 1 retrogene
retro_cfam_227,
Cavia porcellus ENSCPOG00000008868 ortholog_one2one 1 retrogene
retro_cpor_174,
Homo sapiens ENSG00000085365 ortholog_one2one 1 retrogene
retro_hsap_189,
Gorilla gorilla ENSGGOG00000015191 ortholog_one2one 1 retrogene
retro_ggor_269,
Monodelphis domestica ENSMODG00000019731 ortholog_one2one 1 retrogene
retro_mdom_964,
Nomascus leucogenys ENSNLEG00000012775 ortholog_one2one 1 retrogene
retro_nleu_1000,
Tarsius syrichta ENSTSYG00000014113 ortholog_one2one 1 retrogene
retro_tsyr_1676,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_396 83.17 62.81
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Download FASTA sequences of all ENSMMUG00000016398 retrocopies