Parental gene: | CDK5RAP1, ENSMODG00000000175 |
| Aliases: | None |
| Description: | CDK5 regulatory subunit associated protein 1 [Source:HGNC Symbol;Acc:15880] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 1:399553401..399583696(+) |
>ENSMODG00000000175
ATGCAGCCTTTAAAATGTGCATTGAGAACAGGTCAGACTCTGAGGCAGAGTCCATTGTCCTCAGTAATCGGGCAGATACT
CAGGACCTACAGAACAACAAACCATCTCAATGCAGAAGTGTACCCAGAGTTAGAAAAACAGCAAGATGATAGACTCCAGA
GAGATTTCAGCTCTAGATTGGCAGCAGGACCAACATTTCAACACTTTCTAAGAAATGCCTCTGTTCCTCAAGAGAAGTCT
GATTCCTCTGCAACAGTGGAGGATCCACCACCTTATCTTACTCCAGAAGCCCTTTTAGGAAGAGGGAGAAAAGTCTACCT
AGAGACTTATGGTTGCCAAATGAATGTTAATGATGCAGAGATTGCTTGGGCCATTCTTCAGAAGAGTGGCTACTTGAGAA
CTAACACCCTCCACGAGGCTGACGTGATTCTTCTTGTTACATGTTCAATAAGAGAGAAGGCTGAACAGGCTATTTGGAAT
CGTTTAAAACGACTTAAATTCATAAAGGCCAGACGTCTCAGATCACAAGTTCCTCTTCGAATTGGGATTCTAGGATGTAT
GGCCGAAAGGTTGAAGGAAGAGATCCTGCACAGGGAAAAATTGGTGGACATTGTAGCTGGACCAGATGCTTACCGGGATC
TTCCTCGGCTGCTGTCTTTGGCAGATTCTGGCCAGCGATCTGCTAATGTTTTGCTTTCGCTAGAGGAGACCTATGCAGAC
ATCATGCCAGTTCAGACAAGTTCAAACGCCACATCAGCATTTGTGTCAATTATGCGAGGTTGTGATAACATGTGTAGCTA
CTGTATTGTTCCTTTCACACGTGGCCGTGAAAGAAGTCGGCCAATTGCCTCCATTCTGGAAGAAGTGAAGAAACTCTCTC
AGCAGGGTCTGAAAGAAGTAACACTCCTTGGTCAGAATGTCAATAGCTATCAAGACAAGTCAGAAATGCAATTCAATAAC
GCCATGCCCACTCATCTGAGTCGAGGATTTAGTGAAAATTACAAAACCAAGAAAGGAGGCCTTCGGTTTGCTGATCTTCT
GGATCAGGTCTCCAGGGTTGATCCTGAAATGAGGATCCGCTTCACTTCTCCTCACCCCAAGGACTTTCCTGACGAGGTTC
TACAATTGATCCAAGAGCGGAACAATATTTGTAAACAGATACACCTTCCAGCCCAGAGTGGAAGTAACCGGGTCTTGGAA
CTCATGAGAAGAGGATATACAAGGGAAGCTTATTTGGACTTGATTCACCATATCAGAGAGTCTGTTTCAGGAGTGAACCT
TAGCAGTGATTTCATTGCTGGATTCTGTGGAGAAACAGAAGATGATCACCTCCAGACACTGTCATTGCTTCAGGAAGTCC
GATACAATGTGGGTTTCCTTTTTGCATACAGCATGAGACAGAAGACACGAGCATATCACAGGCTTCAAGATGATGTTCCA
GAGGAGGTGAAGCAGAGGCGTCTTGCGGAGCTGATTGCTGCCTTCCGAGAAGGTGCCACAGAAGCCAACATGGCTATGGT
TGGCCACATGCAGCTTATCCTTGTGGAGGGGCCCAGTAAGCGCTCTACCACTGAGTTATGTGGAAGGAATGATGGAAACA
TCAGAGTAATCTTCCCTGACATAGAAATGGGAGATGGCATTGATTGTAGGGGCCTAATCCGAGCCCAGCCAGGAGATTAT
GTGTTAGTGAAGATCACCTCTTCCAATTCTCAGAGCCTGAAAGGAGTTGCTCTCTGCCGAACATCTCTGCAGGAGTATTC
TGCACATTGCTGA
ATGCAGCCTTTAAAATGTGCATTGAGAACAGGTCAGACTCTGAGGCAGAGTCCATTGTCCTCAGTAATCGGGCAGATACT
CAGGACCTACAGAACAACAAACCATCTCAATGCAGAAGTGTACCCAGAGTTAGAAAAACAGCAAGATGATAGACTCCAGA
GAGATTTCAGCTCTAGATTGGCAGCAGGACCAACATTTCAACACTTTCTAAGAAATGCCTCTGTTCCTCAAGAGAAGTCT
GATTCCTCTGCAACAGTGGAGGATCCACCACCTTATCTTACTCCAGAAGCCCTTTTAGGAAGAGGGAGAAAAGTCTACCT
AGAGACTTATGGTTGCCAAATGAATGTTAATGATGCAGAGATTGCTTGGGCCATTCTTCAGAAGAGTGGCTACTTGAGAA
CTAACACCCTCCACGAGGCTGACGTGATTCTTCTTGTTACATGTTCAATAAGAGAGAAGGCTGAACAGGCTATTTGGAAT
CGTTTAAAACGACTTAAATTCATAAAGGCCAGACGTCTCAGATCACAAGTTCCTCTTCGAATTGGGATTCTAGGATGTAT
GGCCGAAAGGTTGAAGGAAGAGATCCTGCACAGGGAAAAATTGGTGGACATTGTAGCTGGACCAGATGCTTACCGGGATC
TTCCTCGGCTGCTGTCTTTGGCAGATTCTGGCCAGCGATCTGCTAATGTTTTGCTTTCGCTAGAGGAGACCTATGCAGAC
ATCATGCCAGTTCAGACAAGTTCAAACGCCACATCAGCATTTGTGTCAATTATGCGAGGTTGTGATAACATGTGTAGCTA
CTGTATTGTTCCTTTCACACGTGGCCGTGAAAGAAGTCGGCCAATTGCCTCCATTCTGGAAGAAGTGAAGAAACTCTCTC
AGCAGGGTCTGAAAGAAGTAACACTCCTTGGTCAGAATGTCAATAGCTATCAAGACAAGTCAGAAATGCAATTCAATAAC
GCCATGCCCACTCATCTGAGTCGAGGATTTAGTGAAAATTACAAAACCAAGAAAGGAGGCCTTCGGTTTGCTGATCTTCT
GGATCAGGTCTCCAGGGTTGATCCTGAAATGAGGATCCGCTTCACTTCTCCTCACCCCAAGGACTTTCCTGACGAGGTTC
TACAATTGATCCAAGAGCGGAACAATATTTGTAAACAGATACACCTTCCAGCCCAGAGTGGAAGTAACCGGGTCTTGGAA
CTCATGAGAAGAGGATATACAAGGGAAGCTTATTTGGACTTGATTCACCATATCAGAGAGTCTGTTTCAGGAGTGAACCT
TAGCAGTGATTTCATTGCTGGATTCTGTGGAGAAACAGAAGATGATCACCTCCAGACACTGTCATTGCTTCAGGAAGTCC
GATACAATGTGGGTTTCCTTTTTGCATACAGCATGAGACAGAAGACACGAGCATATCACAGGCTTCAAGATGATGTTCCA
GAGGAGGTGAAGCAGAGGCGTCTTGCGGAGCTGATTGCTGCCTTCCGAGAAGGTGCCACAGAAGCCAACATGGCTATGGT
TGGCCACATGCAGCTTATCCTTGTGGAGGGGCCCAGTAAGCGCTCTACCACTGAGTTATGTGGAAGGAATGATGGAAACA
TCAGAGTAATCTTCCCTGACATAGAAATGGGAGATGGCATTGATTGTAGGGGCCTAATCCGAGCCCAGCCAGGAGATTAT
GTGTTAGTGAAGATCACCTCTTCCAATTCTCAGAGCCTGAAAGGAGTTGCTCTCTGCCGAACATCTCTGCAGGAGTATTC
TGCACATTGCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 41 .12 RPM |
| SRP007412_cerebellum | 56 .15 RPM |
| SRP007412_heart | 88 .31 RPM |
| SRP007412_kidney | 77 .69 RPM |
| SRP007412_liver | 52 .87 RPM |
| SRP007412_testis | 31 .63 RPM |
No homologs available
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_1278 | 88.99 | 52.88 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000000175 retrocopies