Parental gene:

SH3GL1, ENSMODG00000000931

Aliases:None
Description:SH3-domain GRB2-like 1 [Source:HGNC Symbol;Acc:10830]
Organism:Opossum (Monodelphis domestica)
Coordinates:3:440865070..440954575(-)


>ENSMODG00000000931
ATGTCGGTGGCCGGACTCAAGAAGCAGTTCTACAAGGCGAGCCAGCTGGTCAGTGAGAAAGTTGGAGGAGCTGAAGGGAC
CAAGCTTGATGATGACTTCAAAGAAATGGAAAAGAAAGTGGATGTTACCAGCAAGGCTGTGGCAGAGGTGTTGGCCAGAA
CTATTGAATACCTTCAGCCTAACCCAGCCTCCCGAGCCAAACTGACAATGCTGAATACTGTGTCGAAGATTAGAGGGCAA
GTGAAGAATCCTGGCTATCCACAGTCAGAAGGGCTCTTGGGCGAGTGCATGATTCGGTATGGAAAGGAGCTAGGAGATGA
GTCCAACTTTGGTGACGCGCTTTTGGATGCTGGTGAATCAATGAAGCGATTGGCAGAAGTGAAAGATTCTCTGGACATAG
AAGTCAAACAGAATTTCGTTGACCCCCTCCAGAATCTCTGTGATAAAGACCTAAAGGAGATCCAGCATCATCTGAAGAAG
CTGGAGGGCAGGCGTTTGGATTTTGACTATAAGAAGAAGCGTCAGGGAAAGATACCAGATGAGGAGCTTCGTCAAGCAAT
GGAGAAATTTGAAGAGTCTAAGGAAGTGGCAGAGACCAGTATGCACAACCTTTTGGAGACTGATATTGAGCAGGTGAGCC
AGCTCTCAGCTCTGGTGGATGCACAGCTGGATTACCACCGGCAGGCAGTACAGATCCTGGATGAGCTGGCAGACAAGCTC
AAGCGCAGGATGCGGGAAGCCTCTTCGCGTCCCAAGCGGGAATACAAACCAAAGCCTAGAGATTCCTATGACTTTGGAGA
GCCTGACCAGTCCAATGGAGGTTTCCCTTGTGCCCCAGCCCCCAAGATCACAGCTTCTTCCTCTTTCCGATCCTCTGACA
AGCCCATCCGGACCCCCATCAGGAGTATGCCGCCTCTGGACCAGCCCAGCTGCAAGGCCCTCTATGACTTTGAGCCGGAG
AACGATGGGGAACTGGGCTTCCGGGAGGGCGACATCATCACACTGACCAACCAGATCGATGAAAACTGGAGCCCCAGGCT
CTGCCACAGCCCATTGCAGGCAATGGGTCCCAGATTCTCAAGCATTGTCCCCTTATGGCTTCTCTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Homo sapiens ENSG00000141985 ortholog_one2one 3 retrogenes
retro_hsap_1742, retro_hsap_1745, retro_hsap_1859,
Gorilla gorilla ENSGGOG00000008198 ortholog_one2one 3 retrogenes
retro_ggor_2151, retro_ggor_2258, retro_ggor_675,
Macaca mulatta ENSMMUG00000000273 possible_ortholog 1 retrogene
retro_mmul_1264,
Monodelphis domestica ENSMODG00000008125 within_species_paralog 1 retrogene
retro_mdom_821,
Nomascus leucogenys ENSNLEG00000003122 ortholog_one2one 2 retrogenes
retro_nleu_2914, retro_nleu_3075,
Pongo abelii ENSPPYG00000009405 ortholog_one2one 6 retrogenes
retro_pabe_1488, retro_pabe_1516, retro_pabe_1530, retro_pabe_1542, retro_pabe_1700, retro_pabe_3542,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1530 67.96 54.62
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Download FASTA sequences of all ENSMODG00000000931 retrocopies