Parental gene:

PBX1, ENSMODG00000001238

Aliases:None
Description:pre-B-cell leukemia homeobox 1 [Source:HGNC Symbol;Acc:8632]
Organism:Opossum (Monodelphis domestica)
Coordinates:2:56117885..56186703(+)


>ENSMODG00000001238
ATGCGATTAGACAACATGCTGTTGGCGGAGGGGGTAGCAGGGCCTGAGAAGGGGGGAGGATCTGCGGCAGCGGCGGCGGC
AGCAGCGGCATCTGGGGGAGCTGGCTCAGATAACTCTGTGGAGCATTCCGACTACCGAGCCAAACTCTCACAAATCCGAC
AGATCTACCATACGGAACTGGAGAAATATGAACAGGCATGCAACGAGTTCACTACCCATGTGATGAACCTACTTCGTGAG
CAGAGCCGGACCCGGCCCATCTCCCCGAAGGAGATCGAAAGAATGGTGAGCATCATCCATCGCAAATTCAGCTCCATCCA
GATGCAGCTCAAGCAGAGCACATGTGAAGCGGTCATGATCCTACGCTCACGGTTTTTGGATGCAAGGCGGAAGAGACGAA
ACTTCAACAAGCAAGCCACAGAAATCCTGAATGAGTATTTCTATTCCCATCTCAGCAACCCTTACCCCAGTGAGGAAGCC
AAAGAGGAGCTAGCCAAGAAATGTGGCATCACGGTCTCACAGGTGTCAAACTGGTTTGGAAATAAGCGAATCCGGTACAA
GAAGAACATAGGTAAATTTCAAGAGGAAGCCAATATTTATGCTGCCAAAACGGCTGTCACGGCTACCAATGTTAGAGCCA
ATGGATTGACTTCATCTCAGTGCCTCACTCTTTCCTTTTCAGGTTCTTCCAGTTCTTTTAACATGTCAAACTCTGGAGAT
TTGTTCATGAGCGTGCAGTCACTCAATGGGGATTCTTACCAAGGGGCCCAGGTTGGAGCCAACGTGCAGTCACAGGTGGA
TACCCTTCGCCATGTTATCAGCCAGACAGGAGGATACAGTGACGGACTTGCAGCCAGTCAGATGTACAGTCCGCAGGGCA
TCAGTGCTAATGGAGGTTGGCAGGATGCTACTACCCCTTCATCAGTGACCTCCCCTACAGAAGGCCCTGGCAGTGTTCAC
TCTGATACCTCCAACTGA

Library Parental gene expression (RPM)
SRP007412_brain 0 .00 RPM
SRP007412_cerebellum 0 .00 RPM
SRP007412_heart 0 .00 RPM
SRP007412_kidney 0 .00 RPM
SRP007412_liver 0 .00 RPM
SRP007412_testis 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Procavia capensis ENSPCAG00000002628 ortholog_one2one 1 retrogene
retro_pcap_310,
Sarcophilus harrisii ENSSHAG00000012750 ortholog_one2one 1 retrogene
retro_shar_377,
Tarsius syrichta ENSTSYG00000012332 ortholog_one2one 3 retrogenes
retro_tsyr_1980, retro_tsyr_479, retro_tsyr_723,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1605 61.45 75.08
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Download FASTA sequences of all ENSMODG00000001238 retrocopies